Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho474620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho474620
Thalassiosira oceanica
3.7e-144
512.3
273
100.0
tho365980
Thalassiosira oceanica
7.2e-140
498.0
267
94.8
CC00G172260
Cyclotella cryptica
3.1e-82
306.6
273
62.6
fso195980
Fistulifera solaris
1.5e-57
224.6
208
58.7
fso90020
Fistulifera solaris
1.9e-55
217.6
212
57.1
PSNMU-V1.4_AUG-EV-PASAV3_0013860
Pseudo-nitzschia multistriata
3.1e-50
200.3
280
42.1
ptri84260
Phaeodactylum tricornutum
3.1e-50
200.3
203
54.2
sya00G232750
Synedra acus
1.7e-48
194.5
170
59.4
Sro795_g203520
Seminavis robusta
6.1e-46
186.0
216
49.5
tps21450
Thalassiosira pseudonana
2.5e-15
84.3
41
87.8
ps00G70950
Pseudo-nitzschia multiseries
2.1e-14
81.3
42
78.6
gene1411
Fragilariopsis cylindrus
1.0e-13
79.0
42
78.6
emh569500
Emiliania huxleyi
8.3e-11
69.3
37
73.0
Ec-24_003120
Ectocarpus siliculosus
1.1e-10
68.9
41
68.3
AA0018G00190
Aureococcus anophagefferens
2.0e-09
64.7
45
64.4
AA0015G01700
Aureococcus anophagefferens
3.5e-09
63.9
216
29.2
AT3G19210
Arabidopsis thaliana
8.6e-08
59.3
216
29.6
Naga_100067g27
Nannochloropsis gaditana
8.6e-08
59.3
224
26.3
Cre10.g430950
Chlamydomonas reinhardtii
3.3e-07
57.4
41
61.0
Pp3c8_17910
Physcomitrella patens
2.1e-06
54.7
37
56.8
Cre03.g189000
Chlamydomonas reinhardtii
3.6e-06
53.9
37
62.2
Pp3c16_6690
Physcomitrella patens
3.6e-06
53.9
86
39.5
YBR073W
Saccharomyces cerevisiae strain S288C
3.6e-06
53.9
67
43.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing