Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho242740
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho242740
Thalassiosira oceanica
1.2e-237
823.5
436
100.0
CC00G161610
Cyclotella cryptica
4.9e-82
306.6
451
47.0
tho513220
Thalassiosira oceanica
5.2e-31
137.1
205
39.5
sya00G45860
Synedra acus
5.7e-30
133.7
201
37.8
sya00G198400
Synedra acus
5.7e-30
133.7
201
37.8
sya00G268550
Synedra acus
5.7e-30
133.7
201
37.8
Sro624_g177390
Seminavis robusta
4.8e-29
130.6
199
37.2
CC00G196600
Cyclotella cryptica
1.1e-28
129.4
250
35.2
PSNMU-V1.4_AUG-EV-PASAV3_0088620
Pseudo-nitzschia multistriata
3.2e-25
117.9
222
33.3
fso97000
Fistulifera solaris
7.2e-25
116.7
208
33.2
Sro32_g020930
Seminavis robusta
3.6e-24
114.4
187
34.2
ptri47630
Phaeodactylum tricornutum
5.2e-23
110.5
292
30.1
tps215230
Thalassiosira pseudonana
4.5e-19
97.4
171
38.0
gene14950
Fragilariopsis cylindrus
3.3e-17
91.3
167
33.5
YML032C
Saccharomyces cerevisiae strain S288C
4.7e-16
87.4
228
31.6
emh281440
Emiliania huxleyi
8.9e-15
83.2
174
32.2
emh427020
Emiliania huxleyi
1.2e-14
82.8
174
31.6
CM19G03680
Cyanidioschyzon merolae
2.8e-13
78.2
138
38.4
SPBC119.14
Schizosaccharomyces pombe
1.1e-12
76.3
136
33.8
ENSG00000002016
Homo sapiens
7.0e-12
73.6
138
33.3
SPAC30D11.10
Schizosaccharomyces pombe
7.0e-12
73.6
137
35.8
ptri235830
Phaeodactylum tricornutum
2.5e-09
65.1
112
33.9
gsu86590
Galdieria sulphuraria
3.3e-09
64.7
149
28.2
ps00G09600
Pseudo-nitzschia multiseries
2.1e-08
62.0
87
35.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing