Gene: tho242740 (Thalassiosira oceanica)

Overview top

Gene Identifier
tho242740
Transcript Identifier
tho242740.1
Gene Type
Coding gene
Location
To_g01258 : 2937-4244 : negative

Family Information

Homologous gene family
HOM02SEM003532
(22 genes in 14 species)
specific family

Descriptions

gene_descr
hypothetical protein
eggnog_description
Dna repair

Identifiers

Type Value
pidEJK77155
UniprotK0TI18
old_giTHAOC_01033

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:2000104
IEA
PLAZA Integrative Orthologynegative regulation of DNA-dependent DNA replication SPAC30D11.10
GO:0034599
IEA
PLAZA Integrative Orthologycellular response to oxidative stress ENSG00000002016
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process SPAC30D11.10
GO:0045002
IEA
EggNOGmapperdouble-strand break repair via single-strand annealing
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process YML032C
GO:0045910
IEA
PLAZA Integrative Orthologynegative regulation of DNA recombination SPAC30D11.10
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process SPAC30D11.10
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction SPAC30D11.10
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process SPAC30D11.10
GO:1990505
IEA
PLAZA Integrative Orthologymitotic DNA replication maintenance of fidelity SPAC30D11.10
GO:0051100
IEA
PLAZA Integrative Orthologynegative regulation of binding SPAC30D11.10
GO:0032505
IEA
PLAZA Integrative Orthologyreproduction of a single-celled organism SPAC30D11.10
GO:0051101
IEA
PLAZA Integrative Orthologyregulation of DNA binding SPAC30D11.10
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process SPAC30D11.10
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process SPAC30D11.10
GO:0033043
IEA
PLAZA Integrative Orthologyregulation of organelle organization SPAC30D11.10
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process YML032C
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis SPAC30D11.10
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization SPAC30D11.10
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process SPAC30D11.10
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process SPAC30D11.10
GO:0000709
IEA
PLAZA Integrative Orthologymeiotic joint molecule formation SPAC30D11.10
GO:0051447
IEA
PLAZA Integrative Orthologynegative regulation of meiotic cell cycle SPAC30D11.10
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus ENSG00000002016
GO:0051321
IEA
PLAZA Integrative Orthologymeiotic cell cycle SPAC30D11.10
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission SPAC30D11.10
GO:0043392
IEA
PLAZA Integrative Orthologynegative regulation of DNA binding SPAC30D11.10
GO:0051445
IEA
PLAZA Integrative Orthologyregulation of meiotic cell cycle SPAC30D11.10
GO:0000018
IEA
PLAZA Integrative Orthologyregulation of DNA recombination SPAC30D11.10
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly YML032C
GO:0045165
IEA
PLAZA Integrative Orthologycell fate commitment SPAC30D11.10
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization SPAC30D11.10
GO:0006312
IEA
PLAZA Integrative Orthologymitotic recombination SPAC30D11.10
GO:0045835
IEA
PLAZA Integrative Orthologynegative regulation of meiotic nuclear division SPAC30D11.10
GO:0040020
IEA
PLAZA Integrative Orthologyregulation of meiotic nuclear division SPAC30D11.10
GO:0061982
IEA
PLAZA Integrative Orthologymeiosis I cell cycle process SPAC30D11.10
GO:0031297
IEA
PLAZA Integrative Orthologyreplication fork processing SPAC30D11.10
GO:1902969
IEA
PLAZA Integrative Orthologymitotic DNA replication SPAC30D11.10
GO:0006302
IEA
PLAZA Integrative Orthologydouble-strand break repair SPAC30D11.10
GO:0006301
IEA
PLAZA Integrative Orthologypostreplication repair YML032C
GO:1902298
IEA
PLAZA Integrative Orthologycell cycle DNA replication maintenance of fidelity SPAC30D11.10
GO:0032392
IEA
PLAZA Integrative OrthologyDNA geometric change YML032C
GO:0051259
IEA
PLAZA Integrative Orthologyprotein complex oligomerization ENSG00000002016
GO:0010946
IEA
PLAZA Integrative Orthologyregulation of meiotic joint molecule formation SPAC30D11.10
GO:0010947
IEA
PLAZA Integrative Orthologynegative regulation of meiotic joint molecule formation SPAC30D11.10
GO:0010948
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle process SPAC30D11.10
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process SPAC30D11.10
GO:0060631
IEA
PLAZA Integrative Orthologyregulation of meiosis I SPAC30D11.10
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process SPAC30D11.10
GO:0051260
IEA
EggNOGmapperprotein homooligomerization
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization SPAC30D11.10
GO:0090735
IEA
PLAZA Integrative OrthologyDNA repair complex assembly YML032C
GO:0051129
IEA
PLAZA Integrative Orthologynegative regulation of cellular component organization SPAC30D11.10
GO:0071897
IEA
PLAZA Integrative OrthologyDNA biosynthetic process YML032C
GO:0045128
IEA
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination SPAC30D11.10
GO:0007533
IEA
EggNOGmappermating type switching
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process SPAC30D11.10
GO:0007530
IEA
PLAZA Integrative Orthologysex determination SPAC30D11.10
GO:0045003
IEA
EggNOGmapperdouble-strand break repair via synthesis-dependent strand annealing
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress ENSG00000002016
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress ENSG00000002016
GO:0045005
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication maintenance of fidelity SPAC30D11.10
GO:0007531
IEA
EggNOGmappermating type determination
GO:0033260
IEA
PLAZA Integrative Orthologynuclear DNA replication SPAC30D11.10
GO:0010564
IEA
PLAZA Integrative Orthologyregulation of cell cycle process SPAC30D11.10
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process SPAC30D11.10
GO:0071103
IEA
PLAZA Integrative OrthologyDNA conformation change YML032C
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation SPAC30D11.10
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPAC30D11.10
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization SPAC30D11.10
GO:0044786
IEA
PLAZA Integrative Orthologycell cycle DNA replication SPAC30D11.10
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process SPAC30D11.10
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process SPAC30D11.10
GO:0022413
IEA
PLAZA Integrative Orthologyreproductive process in single-celled organism SPAC30D11.10
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process SPAC30D11.10
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process SPAC30D11.10
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process SPAC30D11.10
GO:0006979
IEA
PLAZA Integrative Orthologyresponse to oxidative stress ENSG00000002016
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000002016
GO:0044092
IEA
PLAZA Integrative Orthologynegative regulation of molecular function SPAC30D11.10
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process YML032C
GO:0051053
IEA
PLAZA Integrative Orthologynegative regulation of DNA metabolic process SPAC30D11.10
GO:0042592
IEA
PLAZA Integrative Orthologyhomeostatic process SPAC30D11.10
GO:0008156
IEA
PLAZA Integrative Orthologynegative regulation of DNA replication SPAC30D11.10
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical ENSG00000002016
GO:2001020
IEA
PLAZA Integrative Orthologyregulation of response to DNA damage stimulus ENSG00000002016
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle SPAC30D11.10
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis YML032C
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction SPAC30D11.10
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process SPAC30D11.10
GO:0051052
IEA
PLAZA Integrative Orthologyregulation of DNA metabolic process SPAC30D11.10
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process SPAC30D11.10
GO:1903046
IEA
PLAZA Integrative Orthologymeiotic cell cycle process SPAC30D11.10
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPAC30D11.10
GO:0010520
IEA
PLAZA Integrative Orthologyregulation of reciprocal meiotic recombination SPAC30D11.10
GO:0090329
IEA
PLAZA Integrative Orthologyregulation of DNA-dependent DNA replication SPAC30D11.10
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process SPAC30D11.10
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process SPAC30D11.10
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process SPAC30D11.10
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process SPAC30D11.10
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization YML032C
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process SPAC30D11.10
GO:0007127
IEA
EggNOGmappermeiosis I
GO:0006275
IEA
PLAZA Integrative Orthologyregulation of DNA replication SPAC30D11.10
GO:0000722
IEA
EggNOGmappertelomere maintenance via recombination
GO:0000723
IEA
PLAZA Integrative Orthologytelomere maintenance SPAC30D11.10
GO:0006277
IEA
PLAZA Integrative OrthologyDNA amplification YML032C
GO:0000724
IEA
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination SPAC30D11.10
GO:0000725
IEA
PLAZA Integrative Orthologyrecombinational repair SPAC30D11.10
GO:0000726
IEA
PLAZA Integrative Orthologynon-recombinational repair YML032C
GO:0000727
IEA
PLAZA Integrative Orthologydouble-strand break repair via break-induced replication YML032C
GO:0000729
IEA
PLAZA Integrative OrthologyDNA double-strand break processing ENSG00000002016
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process SPAC30D11.10
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization YML032C
GO:0140013
IEA
PLAZA Integrative Orthologymeiotic nuclear division SPAC30D11.10
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process SPAC30D11.10
GO:1990426
IEA
PLAZA Integrative Orthologymitotic recombination-dependent replication fork processing SPAC30D11.10
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division SPAC30D11.10
GO:0010639
IEA
PLAZA Integrative Orthologynegative regulation of organelle organization SPAC30D11.10
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process YML032C
GO:0051784
IEA
PLAZA Integrative Orthologynegative regulation of nuclear division SPAC30D11.10
GO:0051783
IEA
PLAZA Integrative Orthologyregulation of nuclear division SPAC30D11.10
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPAC30D11.10
GO:2000819
IEA
PLAZA Integrative Orthologyregulation of nucleotide-excision repair ENSG00000002016
GO:0045786
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle SPAC30D11.10
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process SPAC30D11.10
GO:0006261
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication SPAC30D11.10
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication SPAC30D11.10
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process YML032C
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process SPAC30D11.10
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process SPAC30D11.10
GO:2000242
IEA
PLAZA Integrative Orthologynegative regulation of reproductive process SPAC30D11.10
GO:0035825
IEA
EggNOGmapperhomologous recombination
GO:0051098
IEA
PLAZA Integrative Orthologyregulation of binding SPAC30D11.10
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function SPAC30D11.10
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly YML032C
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly YML032C
GO:0010792
IEA
PLAZA Integrative OrthologyDNA double-strand break processing involved in repair via single-strand annealing ENSG00000002016
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality SPAC30D11.10
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation SPAC30D11.10
GO:0032200
IEA
PLAZA Integrative Orthologytelomere organization SPAC30D11.10
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process SPAC30D11.10
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly YML032C
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process SPAC30D11.10
GO:0110029
IEA
PLAZA Integrative Orthologynegative regulation of meiosis I SPAC30D11.10
GO:0110025
IEA
PLAZA Integrative OrthologyDNA strand resection involved in replication fork processing SPAC30D11.10
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process SPAC30D11.10
GO:0110027
IEA
PLAZA Integrative Orthologynegative regulation of DNA strand resection involved in replication fork processing SPAC30D11.10
GO:0110026
IEA
PLAZA Integrative Orthologyregulation of DNA strand resection involved in replication fork processing SPAC30D11.10
GO:0060249
IEA
PLAZA Integrative Orthologyanatomical structure homeostasis SPAC30D11.10
GO:0000730
IEA
EggNOGmapperDNA recombinase assembly
GO:0000733
IEA
EggNOGmapperDNA strand renaturation
GO:0006289
IEA
PLAZA Integrative Orthologynucleotide-excision repair ENSG00000002016
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPAC30D11.10
GO:0006282
IEA
PLAZA Integrative Orthologyregulation of DNA repair ENSG00000002016
GO:2000241
IEA
PLAZA Integrative Orthologyregulation of reproductive process SPAC30D11.10
GO:0007131
IEA
EggNOGmapperreciprocal meiotic recombination
GO:0035822
IEA
EggNOGmappergene conversion
GO:0000711
IEA
EggNOGmappermeiotic DNA repair synthesis
GO:0000731
IEA
EggNOGmapperDNA synthesis involved in DNA repair
GO:0000734
IEA
EggNOGmappergene conversion at mating-type locus, DNA repair synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000150
IEA
EggNOGmapperrecombinase activity
GO:0140097
IEA
PLAZA Integrative Orthologycatalytic activity, acting on DNA YML032C
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity YML032C
GO:0045027
IEA
PLAZA Integrative OrthologyDNA end binding SPAC30D11.10
GO:1990814
IEA
PLAZA Integrative OrthologyDNA/DNA annealing activity YML032C
GO:0005488
IEA
PLAZA Integrative Orthologybinding SPAC30D11.10
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding SPAC30D11.10
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding ENSG00000002016
GO:0097617
IEA
PLAZA Integrative Orthologyannealing activity YML032C
GO:0003677
IEA
PLAZA Integrative OrthologyDNA binding SPAC30D11.10
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding SPAC30D11.10
GO:0003684
IEA
EggNOGmapperdamaged DNA binding
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding SPAC30D11.10
GO:0005515
IEA
EggNOGmapperprotein binding
GO:0003697
IEA
EggNOGmappersingle-stranded DNA binding
GO:0003690
IEA
PLAZA Integrative Orthologydouble-stranded DNA binding SPAC30D11.10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex ENSG00000002016
GO:0032993
IEA
PLAZA Integrative Orthologyprotein-DNA complex ENSG00000002016
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen YML032C
GO:0005694
IEA
PLAZA Integrative Orthologychromosome SPAC30D11.10
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen YML032C
GO:0000228
IEA
EggNOGmappernuclear chromosome
GO:0090734
IEA
PLAZA Integrative Orthologysite of DNA damage SPAC30D11.10
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen YML032C
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part SPAC30D11.10
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC30D11.10
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC30D11.10
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part YML032C
GO:0005654
IEA
EggNOGmappernucleoplasm
GO:0035861
IEA
PLAZA Integrative Orthologysite of double-strand break SPAC30D11.10
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC30D11.10
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC30D11.10
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC30D11.10
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC30D11.10
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC30D11.10
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen YML032C
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC30D11.10
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC30D11.10
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC30D11.10
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC30D11.10
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC30D11.10
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC30D11.10
GO:0005737
IEA
EggNOGmappercytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007232DNA repair protein Rad52/59/22

No MapMan annotations defined for this gene.
KeggID Description
K01288KEX1; carboxypeptidase D [EC:3.4.16.6]
K10873RAD52; DNA repair and recombination protein RAD52
K10959RAD59; DNA repair protein RAD59
No chloroplast target sequence found.