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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G196410
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G196410
Synedra acus
7.9e-233
807.4
387
100.0
Sro70_g039030
Seminavis robusta
1.9e-146
520.4
344
72.7
gene18213
Fragilariopsis cylindrus
1.6e-145
517.3
334
71.6
ps00G65070
Pseudo-nitzschia multiseries
2.1e-145
516.9
337
71.5
ptri72160
Phaeodactylum tricornutum
5.1e-139
495.7
356
67.4
fso64760
Fistulifera solaris
6.9e-136
485.3
390
62.8
fso43770
Fistulifera solaris
7.6e-135
481.9
390
62.6
fso199510
Fistulifera solaris
3.0e-115
416.8
306
60.8
fso73640
Fistulifera solaris
3.9e-115
416.4
306
61.4
ptri69840
Phaeodactylum tricornutum
4.8e-113
409.5
327
59.3
CC00G149660
Cyclotella cryptica
2.7e-108
393.7
324
55.9
tps193950
Thalassiosira pseudonana
5.3e-104
379.4
272
65.1
tps142420
Thalassiosira pseudonana
4.6e-100
366.3
272
61.8
CC00G122160
Cyclotella cryptica
8.8e-99
362.1
244
68.9
Sro695_g188680
Seminavis robusta
4.5e-95
349.7
315
55.2
sya00G161050
Synedra acus
2.6e-82
307.4
280
48.2
ps00G33510
Pseudo-nitzschia multiseries
4.1e-80
300.1
316
43.0
ptri130290
Phaeodactylum tricornutum
5.3e-80
299.7
281
48.0
gene16313
Fragilariopsis cylindrus
1.6e-79
298.1
280
47.9
Sro968_g226070
Seminavis robusta
1.0e-78
295.4
280
47.9
fso77080
Fistulifera solaris
1.3e-78
295.0
281
47.7
Sro99_g050950
Seminavis robusta
5.0e-78
293.1
293
46.4
fso77050
Fistulifera solaris
5.5e-77
289.7
319
46.4
fso191720
Fistulifera solaris
9.4e-77
288.9
319
46.4
tps130000
Thalassiosira pseudonana
1.2e-76
288.5
273
47.3
fso160310
Fistulifera solaris
1.4e-75
285.0
281
45.9
tho217020
Thalassiosira oceanica
3.1e-72
273.9
274
46.7
sya00G00440
Synedra acus
3.1e-64
247.3
182
59.3
Sro9_g007140
Seminavis robusta
1.5e-50
201.8
144
60.4
tho328140
Thalassiosira oceanica
2.3e-43
177.9
287
38.3
CC00G69060
Cyclotella cryptica
4.1e-40
167.2
180
40.0
CM13G01410
Cyanidioschyzon merolae
1.3e-38
162.2
278
36.7
ENSG00000163743
Homo sapiens
1.7e-38
161.8
262
33.2
FBgn0031816
Drosophila melanogaster
3.3e-37
157.5
272
32.0
AT3G62970
Arabidopsis thaliana
1.2e-34
149.1
271
35.8
Cre05.g248550
Chlamydomonas reinhardtii
1.5e-34
148.7
275
33.8
Cre17.g718300
Chlamydomonas reinhardtii
1.9e-32
141.7
272
34.6
AT1G74770
Arabidopsis thaliana
2.4e-32
141.4
274
30.3
CC00G86210
Cyclotella cryptica
1.2e-31
139.0
276
29.3
AT3G18290
Arabidopsis thaliana
1.6e-31
138.7
279
31.5
ccr65580
Chondrus crispus
2.7e-31
137.9
318
28.9
Pp3c11_6970
Physcomitrella patens
2.7e-31
137.9
272
34.6
AT1G18910
Arabidopsis thaliana
1.0e-30
136.0
273
31.9
Pp3c10_4820
Physcomitrella patens
3.0e-30
134.4
274
32.1
Pp3c6_1960
Physcomitrella patens
8.6e-30
132.9
273
32.6
tps146910
Thalassiosira pseudonana
1.1e-29
132.5
215
32.6
SPAC2F3.16
Schizosaccharomyces pombe
5.6e-29
130.2
278
29.9
ccr161060
Chondrus crispus
9.6e-29
129.4
287
30.7
Pp3c25_14501
Physcomitrella patens
1.2e-28
129.0
275
32.0
Pp3c25_14500
Physcomitrella patens
1.2e-28
129.0
275
32.0
fso155640
Fistulifera solaris
2.1e-28
128.3
277
29.2
AT5G22920
Arabidopsis thaliana
2.8e-28
127.9
272
32.7
Pp3c14_5600
Physcomitrella patens
2.8e-28
127.9
323
30.0
Ec-26_004520
Ectocarpus siliculosus
3.6e-28
127.5
295
32.2
Pp3c2_31820
Physcomitrella patens
3.6e-28
127.5
272
33.1
Pp3c1_6070
Physcomitrella patens
6.2e-28
126.7
276
33.3
Naga_100090g9
Nannochloropsis gaditana
1.8e-27
125.2
280
30.0
AT5G18650
Arabidopsis thaliana
3.1e-27
124.4
272
32.0
gsu76240
Galdieria sulphuraria
2.0e-26
121.7
281
31.3
AT5G25560
Arabidopsis thaliana
2.7e-23
111.3
242
32.6
pte243060
Paramecium tetraurelia
7.8e-23
109.8
275
30.5
pte443830
Paramecium tetraurelia
3.9e-22
107.5
276
31.9
tho87860
Thalassiosira oceanica
6.6e-22
106.7
236
31.8
pte760660
Paramecium tetraurelia
2.1e-20
101.7
275
30.9
fso150310
Fistulifera solaris
1.1e-19
99.4
216
27.8
Sro9_g007130
Seminavis robusta
3.5e-15
84.3
44
79.5
CC00G85450
Cyclotella cryptica
4.8e-12
73.9
45
62.2
ccr143140
Chondrus crispus
6.9e-11
70.1
184
32.1
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
1.7e-09
65.5
105
34.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing