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Functional clusters
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri10280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri10280
Phaeodactylum tricornutum
8.1e-180
630.9
308
100.0
Sro506_g156280
Seminavis robusta
3.9e-25
117.1
224
32.6
ps00G155910
Pseudo-nitzschia multiseries
1.4e-22
108.6
253
33.6
gene9793
Fragilariopsis cylindrus
2.4e-22
107.8
168
37.5
Sro776_g200900
Seminavis robusta
5.3e-22
106.7
236
33.1
tho196600
Thalassiosira oceanica
6.9e-22
106.3
224
31.2
gene6749
Fragilariopsis cylindrus
1.5e-21
105.1
274
31.4
Sro718_g192230
Seminavis robusta
2.0e-21
104.8
250
32.8
fso33230
Fistulifera solaris
6.5e-20
99.8
167
34.7
CC00G57010
Cyclotella cryptica
8.4e-20
99.4
168
32.7
ptri229170
Phaeodactylum tricornutum
4.2e-19
97.1
161
34.2
ptri228830
Phaeodactylum tricornutum
7.1e-19
96.3
227
28.2
Sro1294_g260200
Seminavis robusta
9.3e-19
95.9
166
34.9
ps00G192350
Pseudo-nitzschia multiseries
2.1e-18
94.7
164
32.9
CC00G198070
Cyclotella cryptica
3.5e-18
94.0
167
35.3
tps170710
Thalassiosira pseudonana
6.0e-18
93.2
234
27.8
PSNMU-V1.4_AUG-EV-PASAV3_0081540
Pseudo-nitzschia multistriata
1.0e-17
92.4
164
31.7
ps00G168960
Pseudo-nitzschia multiseries
1.3e-17
92.0
160
30.0
Sro776_g200870
Seminavis robusta
1.3e-17
92.0
238
28.2
sya00G12100
Synedra acus
2.3e-17
91.3
190
29.5
Sro1228_g254370
Seminavis robusta
5.1e-17
90.1
164
32.3
ps00G135050
Pseudo-nitzschia multiseries
1.1e-16
89.0
221
28.1
ptri158990
Phaeodactylum tricornutum
1.5e-16
88.6
205
28.3
ptri211550
Phaeodactylum tricornutum
1.5e-16
88.6
233
29.6
CC00G124300
Cyclotella cryptica
1.9e-16
88.2
239
27.2
gene16432
Fragilariopsis cylindrus
1.9e-16
88.2
164
29.3
PSNMU-V1.4_AUG-EV-PASAV3_0030110
Pseudo-nitzschia multistriata
2.5e-16
87.8
228
29.4
ps00G01920
Pseudo-nitzschia multiseries
3.3e-16
87.4
233
29.2
ptri223580
Phaeodactylum tricornutum
3.3e-16
87.4
230
27.0
PSNMU-V1.4_AUG-EV-PASAV3_0074230
Pseudo-nitzschia multistriata
4.3e-16
87.0
160
29.4
Sro245_g097390
Seminavis robusta
5.7e-16
86.7
164
31.7
sya00G242440
Synedra acus
5.7e-16
86.7
277
24.9
fso123570
Fistulifera solaris
7.4e-16
86.3
249
24.9
tho132960
Thalassiosira oceanica
7.4e-16
86.3
234
26.1
fso193460
Fistulifera solaris
1.3e-15
85.5
246
27.6
fso59730
Fistulifera solaris
1.6e-15
85.1
244
26.2
CC00G196020
Cyclotella cryptica
2.1e-15
84.7
220
27.3
tps71590
Thalassiosira pseudonana
2.1e-15
84.7
161
27.3
fso123550
Fistulifera solaris
2.8e-15
84.3
166
31.3
gene16545
Fragilariopsis cylindrus
3.7e-15
84.0
164
28.0
Sro1353_g265400
Seminavis robusta
3.7e-15
84.0
217
30.9
sya00G43360
Synedra acus
3.7e-15
84.0
170
29.4
fso54280
Fistulifera solaris
6.3e-15
83.2
166
31.3
fso62790
Fistulifera solaris
6.3e-15
83.2
173
31.2
tps170450
Thalassiosira pseudonana
6.3e-15
83.2
308
27.3
sya00G53380
Synedra acus
8.2e-15
82.8
229
27.5
CC00G64720
Cyclotella cryptica
1.8e-14
81.6
165
30.3
tho20540
Thalassiosira oceanica
2.4e-14
81.3
214
26.6
fso98040
Fistulifera solaris
4.1e-14
80.5
173
30.1
sya00G117100
Synedra acus
4.1e-14
80.5
126
36.5
CC00G136890
Cyclotella cryptica
5.3e-14
80.1
230
26.5
Sro458_g147090
Seminavis robusta
5.3e-14
80.1
249
26.1
tps32140
Thalassiosira pseudonana
5.3e-14
80.1
229
30.1
CC00G13180
Cyclotella cryptica
6.9e-14
79.7
168
32.7
Sro299_g111340
Seminavis robusta
6.9e-14
79.7
242
27.7
CC00G113840
Cyclotella cryptica
9.0e-14
79.3
223
26.9
tho194020
Thalassiosira oceanica
1.2e-13
79.0
168
29.8
fso90480
Fistulifera solaris
1.5e-13
78.6
179
30.7
sya00G25330
Synedra acus
2.0e-13
78.2
126
35.7
AA0009G02010
Aureococcus anophagefferens
2.6e-13
77.8
161
30.4
Sro3210_g345280
Seminavis robusta
2.6e-13
77.8
170
31.8
Sro299_g111270
Seminavis robusta
2.6e-13
77.8
170
31.8
Sro748_g196620
Seminavis robusta
2.6e-13
77.8
225
28.0
ptri226930
Phaeodactylum tricornutum
3.4e-13
77.4
161
30.4
Sro975_g226830
Seminavis robusta
4.5e-13
77.0
168
32.1
tps29450
Thalassiosira pseudonana
4.5e-13
77.0
233
26.2
tps38520
Thalassiosira pseudonana
4.5e-13
77.0
220
25.9
sya00G230590
Synedra acus
5.9e-13
76.6
163
29.4
tps29390
Thalassiosira pseudonana
5.9e-13
76.6
233
26.2
tps150290
Thalassiosira pseudonana
5.9e-13
76.6
162
27.2
fso125600
Fistulifera solaris
7.6e-13
76.3
179
29.6
PSNMU-V1.4_AUG-EV-PASAV3_0095090
Pseudo-nitzschia multistriata
7.6e-13
76.3
190
31.1
Sro560_g166640
Seminavis robusta
7.6e-13
76.3
226
30.1
tho592300
Thalassiosira oceanica
7.6e-13
76.3
161
29.8
Sro1087_g239840
Seminavis robusta
1.0e-12
75.9
167
28.7
sya00G17600
Synedra acus
1.0e-12
75.9
214
27.1
tps31090
Thalassiosira pseudonana
1.0e-12
75.9
177
26.6
ps00G174510
Pseudo-nitzschia multiseries
2.2e-12
74.7
172
33.1
sya00G264280
Synedra acus
5.0e-12
73.6
251
26.7
fso179420
Fistulifera solaris
8.5e-12
72.8
141
34.0
tps29510
Thalassiosira pseudonana
1.1e-11
72.4
223
25.1
PSNMU-V1.4_AUG-EV-PASAV3_0066060
Pseudo-nitzschia multistriata
1.9e-11
71.6
283
23.3
AA0008G00810
Aureococcus anophagefferens
2.5e-11
71.2
156
30.8
tps31050
Thalassiosira pseudonana
2.5e-11
71.2
177
25.4
sya00G205170
Synedra acus
3.2e-11
70.9
180
28.9
gene13799
Fragilariopsis cylindrus
4.2e-11
70.5
200
27.5
gene14534
Fragilariopsis cylindrus
5.5e-11
70.1
146
33.6
gene516
Fragilariopsis cylindrus
5.5e-11
70.1
146
33.6
ps00G49760
Pseudo-nitzschia multiseries
5.5e-11
70.1
207
24.6
Sro1015_g231520
Seminavis robusta
5.5e-11
70.1
250
25.6
tps97340
Thalassiosira pseudonana
5.5e-11
70.1
177
29.9
tps225440
Thalassiosira pseudonana
5.5e-11
70.1
167
31.1
Sro299_g111520
Seminavis robusta
7.2e-11
69.7
169
30.8
tho256100
Thalassiosira oceanica
7.2e-11
69.7
163
33.1
FBgn0015625
Drosophila melanogaster
9.3e-11
69.3
162
31.5
gene7436
Fragilariopsis cylindrus
9.3e-11
69.3
110
36.4
fso184000
Fistulifera solaris
9.3e-11
69.3
128
33.6
sya00G242400
Synedra acus
9.3e-11
69.3
165
26.7
tps144100
Thalassiosira pseudonana
1.6e-10
68.6
142
27.5
CC00G96200
Cyclotella cryptica
2.1e-10
68.2
121
28.1
CC00G125810
Cyclotella cryptica
2.1e-10
68.2
155
26.5
ptri131110
Phaeodactylum tricornutum
2.1e-10
68.2
184
27.2
Sro107_g054050
Seminavis robusta
2.1e-10
68.2
244
23.4
CC00G32860
Cyclotella cryptica
2.7e-10
67.8
177
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0031450
Pseudo-nitzschia multistriata
2.7e-10
67.8
115
37.4
CC00G152580
Cyclotella cryptica
3.6e-10
67.4
177
29.9
tps105880
Thalassiosira pseudonana
4.6e-10
67.0
194
30.4
AA0017G01530
Aureococcus anophagefferens
6.1e-10
66.6
190
31.1
Sro844_g209850
Seminavis robusta
6.1e-10
66.6
173
28.9
Sro57_g033130
Seminavis robusta
6.1e-10
66.6
173
28.9
AT1G16330
Arabidopsis thaliana
7.9e-10
66.2
286
24.5
CC00G175600
Cyclotella cryptica
1.0e-09
65.9
175
30.3
sya00G204800
Synedra acus
1.0e-09
65.9
123
31.7
CC00G47830
Cyclotella cryptica
1.3e-09
65.5
163
28.8
CC00G79300
Cyclotella cryptica
1.3e-09
65.5
163
28.8
gene17789
Fragilariopsis cylindrus
1.3e-09
65.5
177
25.4
fso143640
Fistulifera solaris
1.8e-09
65.1
207
27.5
tps29530
Thalassiosira pseudonana
1.8e-09
65.1
174
25.3
AT4G34160
Arabidopsis thaliana
2.3e-09
64.7
189
27.0
CC00G26970
Cyclotella cryptica
2.3e-09
64.7
179
25.7
Cre03.g207900
Chlamydomonas reinhardtii
3.0e-09
64.3
165
27.3
ps00G113470
Pseudo-nitzschia multiseries
3.0e-09
64.3
190
26.8
sya00G111690
Synedra acus
3.0e-09
64.3
162
27.2
tps76060
Thalassiosira pseudonana
3.0e-09
64.3
125
31.2
tho435300
Thalassiosira oceanica
6.7e-09
63.2
207
26.6
sya00G128810
Synedra acus
8.7e-09
62.8
117
34.2
tps29430
Thalassiosira pseudonana
8.7e-09
62.8
176
27.3
AT1G47220
Arabidopsis thaliana
1.1e-08
62.4
198
24.7
SPCC4E9.02
Schizosaccharomyces pombe
1.1e-08
62.4
169
27.8
ENSG00000133101
Homo sapiens
1.5e-08
62.0
254
26.0
ps00G83920
Pseudo-nitzschia multiseries
1.9e-08
61.6
174
28.7
tho332820
Thalassiosira oceanica
1.9e-08
61.6
163
28.8
tps102120
Thalassiosira pseudonana
1.9e-08
61.6
230
22.2
tps105860
Thalassiosira pseudonana
1.9e-08
61.6
120
35.0
WBGene00000868
Caenorhabditis elegans
2.5e-08
61.2
179
27.4
fso177160
Fistulifera solaris
2.5e-08
61.2
180
25.6
tps209500
Thalassiosira pseudonana
2.5e-08
61.2
215
23.7
CC00G172280
Cyclotella cryptica
3.3e-08
60.8
160
28.8
fso15630
Fistulifera solaris
3.3e-08
60.8
200
27.5
fso143570
Fistulifera solaris
3.3e-08
60.8
118
32.2
ps00G117540
Pseudo-nitzschia multiseries
3.3e-08
60.8
166
24.7
SPBC582.03
Schizosaccharomyces pombe
3.3e-08
60.8
185
25.9
CC00G154580
Cyclotella cryptica
4.3e-08
60.5
242
22.7
fso18850
Fistulifera solaris
4.3e-08
60.5
162
27.2
fso181370
Fistulifera solaris
4.3e-08
60.5
191
28.3
sya00G156000
Synedra acus
4.3e-08
60.5
173
28.9
tho398340
Thalassiosira oceanica
5.7e-08
60.1
167
28.1
tps109520
Thalassiosira pseudonana
5.7e-08
60.1
251
22.7
AT5G43080
Arabidopsis thaliana
7.4e-08
59.7
196
24.5
fso182460
Fistulifera solaris
7.4e-08
59.7
164
27.4
ENSG00000105219
Homo sapiens
7.4e-08
59.7
157
32.5
ENSG00000118816
Homo sapiens
7.4e-08
59.7
163
29.4
pte654950
Paramecium tetraurelia
7.4e-08
59.7
100
32.0
Sro1512_g278790
Seminavis robusta
7.4e-08
59.7
166
28.3
AT1G47210
Arabidopsis thaliana
9.7e-08
59.3
197
24.4
AT4G35620
Arabidopsis thaliana
9.7e-08
59.3
163
25.2
Sro299_g111360
Seminavis robusta
9.7e-08
59.3
170
28.2
AT1G44110
Arabidopsis thaliana
1.3e-07
58.9
199
26.1
CC00G27720
Cyclotella cryptica
1.6e-07
58.5
180
25.0
CC00G168640
Cyclotella cryptica
1.6e-07
58.5
144
28.5
Sro251_g099220
Seminavis robusta
1.6e-07
58.5
165
26.1
AT1G47230
Arabidopsis thaliana
2.2e-07
58.2
197
22.3
Ec-01_009390
Ectocarpus siliculosus
2.2e-07
58.2
199
24.6
AT5G67260
Arabidopsis thaliana
2.8e-07
57.8
165
24.8
pte540220
Paramecium tetraurelia
3.7e-07
57.4
102
34.3
Sro299_g111490
Seminavis robusta
3.7e-07
57.4
171
26.9
tps106360
Thalassiosira pseudonana
3.7e-07
57.4
117
29.9
tho159540
Thalassiosira oceanica
4.8e-07
57.0
158
29.1
tps137160
Thalassiosira pseudonana
4.8e-07
57.0
161
24.8
ENSG00000145386
Homo sapiens
6.3e-07
56.6
183
25.1
Pp3c9_18910
Physcomitrella patens
6.3e-07
56.6
163
25.8
YLR210W
Saccharomyces cerevisiae strain S288C
6.3e-07
56.6
163
27.6
tho110160
Thalassiosira oceanica
6.3e-07
56.6
133
27.8
AA0012G01350
Aureococcus anophagefferens
8.2e-07
56.2
160
28.1
gene11947
Fragilariopsis cylindrus
8.2e-07
56.2
107
28.0
ENSG00000110092
Homo sapiens
8.2e-07
56.2
160
24.4
fso180330
Fistulifera solaris
1.1e-06
55.8
173
23.7
pte530190
Paramecium tetraurelia
1.1e-06
55.8
100
33.0
AT3G50070
Arabidopsis thaliana
1.4e-06
55.5
170
24.1
WBGene00000865
Caenorhabditis elegans
1.4e-06
55.5
170
27.6
tho246200
Thalassiosira oceanica
1.4e-06
55.5
214
23.4
CC00G122630
Cyclotella cryptica
1.8e-06
55.1
187
25.1
CC00G139230
Cyclotella cryptica
1.8e-06
55.1
193
26.4
YDL155W
Saccharomyces cerevisiae strain S288C
1.8e-06
55.1
169
26.0
tps225460
Thalassiosira pseudonana
1.8e-06
55.1
180
24.4
ENSG00000113328
Homo sapiens
2.4e-06
54.7
160
25.0
Naga_100139g11
Nannochloropsis gaditana
2.4e-06
54.7
127
30.7
Pp3c15_21520
Physcomitrella patens
2.4e-06
54.7
163
25.2
Sro2092_g314100
Seminavis robusta
2.4e-06
54.7
160
29.4
CM09G02270
Cyanidioschyzon merolae
3.1e-06
54.3
166
26.5
Sro1087_g239830
Seminavis robusta
3.1e-06
54.3
136
30.1
gsu98950
Galdieria sulphuraria
4.1e-06
53.9
162
22.8
tps95720
Thalassiosira pseudonana
4.1e-06
53.9
173
21.4
pte613940
Paramecium tetraurelia
5.3e-06
53.5
100
31.0
FBgn0000404
Drosophila melanogaster
6.9e-06
53.1
158
24.7
fso184930
Fistulifera solaris
6.9e-06
53.1
166
23.5
Pp3c1_38770
Physcomitrella patens
6.9e-06
53.1
155
24.5
CC00G13870
Cyclotella cryptica
9.1e-06
52.8
234
22.6
emh525840
Emiliania huxleyi
9.1e-06
52.8
161
25.5
Sro331_g119100
Seminavis robusta
9.1e-06
52.8
155
25.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (8 genes)
Thalassiosira pseudonana (26 genes)
Thalassiosira oceanica (12 genes)
Pseudo-nitzschia multiseries (10 genes)
Fistulifera solaris (21 genes)
Fragilariopsis cylindrus (10 genes)
Cyclotella cryptica (23 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (28 genes)
Synedra acus (15 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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