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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte785740
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte785740
Paramecium tetraurelia
0.0e+00
1322.8
653
100.0
pte621940
Paramecium tetraurelia
0.0e+00
1207.2
665
89.0
pte782050
Paramecium tetraurelia
0.0e+00
1195.6
665
88.0
pte720140
Paramecium tetraurelia
0.0e+00
1187.6
657
88.1
Sro27_g018090
Seminavis robusta
2.6e-164
580.5
696
45.0
Naga_100050g6
Nannochloropsis gaditana
1.3e-163
578.2
672
47.0
fso180700
Fistulifera solaris
2.1e-161
570.9
691
45.6
ptri19750
Phaeodactylum tricornutum
2.1e-161
570.9
699
44.6
sya00G108180
Synedra acus
2.7e-161
570.5
666
45.3
Pp3c2_3850
Physcomitrella patens
3.6e-161
570.1
527
53.1
fso185290
Fistulifera solaris
2.3e-160
567.4
692
44.8
ccr86180
Chondrus crispus
2.8e-158
560.5
504
53.2
gene3183
Fragilariopsis cylindrus
3.7e-158
560.1
490
54.9
Ec-08_005570
Ectocarpus siliculosus
4.1e-157
556.6
680
43.8
CC00G78430
Cyclotella cryptica
6.5e-155
549.3
497
53.9
tps220550
Thalassiosira pseudonana
1.2e-153
545.0
493
53.3
ps00G142430
Pseudo-nitzschia multiseries
2.7e-153
543.9
483
54.2
YHR020W
Saccharomyces cerevisiae strain S288C
2.7e-153
543.9
634
45.4
AT3G62120
Arabidopsis thaliana
8.0e-153
542.3
499
51.7
WBGene00004189
Caenorhabditis elegans
1.0e-152
542.0
503
52.3
tho310420
Thalassiosira oceanica
5.7e-151
536.2
493
53.3
CM19G00240
Cyanidioschyzon merolae
7.5e-151
535.8
523
50.1
Cre10.g429100
Chlamydomonas reinhardtii
1.8e-149
531.2
496
50.8
SPBC19C7.06
Schizosaccharomyces pombe
5.9e-148
526.2
640
45.0
AA0034G00850
Aureococcus anophagefferens
4.2e-146
520.0
505
52.3
ENSG00000136628
Homo sapiens
3.6e-145
516.9
501
52.7
gene20932
Fragilariopsis cylindrus
6.1e-145
516.2
419
56.6
gsu90040
Galdieria sulphuraria
6.1e-145
516.2
471
52.7
FBgn0005674
Drosophila melanogaster
3.4e-143
510.4
501
50.9
ps00G181630
Pseudo-nitzschia multiseries
1.8e-120
434.9
493
45.2
gsu68560
Galdieria sulphuraria
4.4e-103
377.1
516
38.4
fso42340
Fistulifera solaris
5.4e-101
370.2
525
37.9
AT5G52520
Arabidopsis thaliana
2.7e-100
367.9
505
39.4
gene16475
Fragilariopsis cylindrus
7.8e-100
366.3
519
38.3
fso20350
Fistulifera solaris
2.3e-99
364.8
525
37.5
PSNMU-V1.4_AUG-EV-PASAV3_0083450
Pseudo-nitzschia multistriata
6.6e-99
363.2
519
38.0
PSNMU-V1.4_AUG-EV-PASAV3_0088140
Pseudo-nitzschia multistriata
6.6e-99
363.2
427
45.0
Pp3c21_580
Physcomitrella patens
1.1e-98
362.5
524
38.2
ptri230410
Phaeodactylum tricornutum
9.6e-98
359.4
648
34.0
tps99010
Thalassiosira pseudonana
1.3e-97
359.0
525
38.3
sya00G52470
Synedra acus
2.8e-97
357.8
526
37.3
Cre09.g406200
Chlamydomonas reinhardtii
1.8e-96
355.1
500
37.8
tho229780
Thalassiosira oceanica
6.9e-96
353.2
517
37.5
Naga_100042g42
Nannochloropsis gaditana
9.0e-96
352.8
548
36.5
CM10G00990
Cyanidioschyzon merolae
2.6e-95
351.3
523
38.2
AA0001G05430
Aureococcus anophagefferens
4.5e-95
350.5
518
37.1
CC00G91550
Cyclotella cryptica
7.6e-95
349.7
523
37.9
Sro213_g088490
Seminavis robusta
1.3e-94
349.0
518
37.5
ps00G23270
Pseudo-nitzschia multiseries
5.3e-88
327.0
507
36.1
ccr148240
Chondrus crispus
1.5e-87
325.5
486
37.2
sya00G22750
Synedra acus
1.4e-80
302.4
524
34.9
emh540450
Emiliania huxleyi
4.2e-69
264.2
547
31.3
PSNMU-V1.4_AUG-EV-PASAV3_0054880
Pseudo-nitzschia multistriata
1.7e-41
172.6
227
41.0
AT5G10880
Arabidopsis thaliana
2.0e-31
139.0
235
35.3
emh608830
Emiliania huxleyi
1.2e-10
70.1
167
31.7
AT1G44835
Arabidopsis thaliana
1.5e-10
69.7
124
35.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing