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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte73500
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte73500
Paramecium tetraurelia
0.0e+00
1693.7
876
100.0
pte344330
Paramecium tetraurelia
0.0e+00
1566.2
877
92.2
pte263930
Paramecium tetraurelia
1.4e-181
638.3
904
40.3
pte316560
Paramecium tetraurelia
2.9e-174
614.0
869
39.8
ENSG00000126216
Homo sapiens
2.5e-69
265.4
705
28.2
AT5G06680
Arabidopsis thaliana
4.5e-66
254.6
663
27.6
gsu85750
Galdieria sulphuraria
6.4e-65
250.8
607
28.7
Pp3c20_16750
Physcomitrella patens
1.4e-64
249.6
666
26.9
Pp3c24_16220
Physcomitrella patens
4.6e-63
244.6
687
26.5
SPBC428.20c
Schizosaccharomyces pombe
6.9e-59
230.7
765
27.6
FBgn0001612
Drosophila melanogaster
1.6e-39
166.4
670
24.5
Naga_100060g14
Nannochloropsis gaditana
1.8e-35
152.9
541
25.7
ptri173770
Phaeodactylum tricornutum
3.4e-34
148.7
551
24.9
Ec-01_012030
Ectocarpus siliculosus
7.7e-34
147.5
413
27.8
emh763790
Emiliania huxleyi
2.2e-33
146.0
684
23.7
Cre11.g467745
Chlamydomonas reinhardtii
9.4e-32
140.6
631
21.9
tps174470
Thalassiosira pseudonana
3.6e-31
138.7
739
23.3
ps00G07860
Pseudo-nitzschia multiseries
2.3e-30
136.0
746
23.3
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
2.6e-29
132.5
697
23.5
fso116280
Fistulifera solaris
9.7e-29
130.6
670
23.3
CC00G49290
Cyclotella cryptica
1.3e-28
130.2
724
23.3
gene13257
Fragilariopsis cylindrus
2.2e-28
129.4
599
24.2
fso25450
Fistulifera solaris
3.7e-28
128.6
615
23.1
AT5G17410
Arabidopsis thaliana
2.4e-27
125.9
582
22.5
ENSG00000130640
Homo sapiens
1.0e-22
110.5
717
21.1
sya00G96190
Synedra acus
4.0e-22
108.6
517
22.4
Pp3c8_20000
Physcomitrella patens
5.2e-22
108.2
542
20.7
FBgn0026430
Drosophila melanogaster
1.2e-21
107.1
580
22.2
sya00G73720
Synedra acus
2.8e-20
102.4
613
23.3
gene13733
Fragilariopsis cylindrus
1.1e-19
100.5
589
20.7
pte710980
Paramecium tetraurelia
5.3e-19
98.2
534
21.7
YNL126W
Saccharomyces cerevisiae strain S288C
9.1e-19
97.4
510
23.5
ps00G06430
Pseudo-nitzschia multiseries
3.5e-18
95.5
685
20.7
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
1.0e-17
94.0
707
19.8
Pp3c13_20568
Physcomitrella patens
1.0e-17
94.0
635
20.5
Pp3c13_20560
Physcomitrella patens
1.0e-17
94.0
635
20.5
Pp3c8_15910
Physcomitrella patens
2.7e-15
85.9
234
29.1
fso30500
Fistulifera solaris
1.8e-14
83.2
636
22.0
Sro101_g051510
Seminavis robusta
8.8e-14
80.9
276
25.4
fso119530
Fistulifera solaris
1.2e-13
80.5
642
22.7
Pp3c14_20420
Physcomitrella patens
2.0e-10
69.7
231
20.8
AT3G53760
Arabidopsis thaliana
7.7e-10
67.8
332
21.7
Ec-20_003870
Ectocarpus siliculosus
2.5e-08
62.8
278
23.4
Ec-01_012010
Ectocarpus siliculosus
7.2e-08
61.2
148
30.4
CC00G57600
Cyclotella cryptica
6.1e-07
58.2
483
21.3
SPBC365.15
Schizosaccharomyces pombe
3.0e-06
55.8
418
20.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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