Gene: AT5G06680 (Arabidopsis thaliana)

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Gene Identifier
AT5G06680
Transcript Identifier
AT5G06680.1
Gene Type
Coding gene
Location
5 : 2056741-2059369 : positive

Family Information

Homologous gene family
HOM02SEM001769
(35 genes in 23 species)
specific family

Descriptions

Curated Summary
Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. Enriched at the post-cytokinetic cell edges in leaves and roots.
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Identifiers

Type Value
aliasGAMMA TUBULIN COMPLEX PROTEIN 3
aliasSPINDLE POLE BODY COMPONENT 98
aliasSPC98
aliasARABIDOPSIS THALIANA GAMMA TUBULIN COMPLEX PROTEIN 3
aliasGCP3
aliasATSPC98
aliasATGCP3
aliasspindle pole body component 98

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization
GO:0007020
TAS
Gene Ontologymicrotubule nucleation1 2
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0009624
IDA
Gene Ontologyresponse to nematode3 4
GO:0090063
IDA
Gene Ontologypositive regulation of microtubule nucleation5 6
GO:0007051
IEA
PLAZA Integrative Orthologyspindle organization SPBC428.20c
GO:0070925
IEA
PLAZA Integrative Orthologyorganelle assembly SPBC428.20c
GO:0022604
IEA
PLAZA Integrative Orthologyregulation of cell morphogenesis SPBC428.20c
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPBC428.20c
GO:0007052
IEA
PLAZA Integrative Orthologymitotic spindle organization SPBC428.20c
GO:1903046
IEA
PLAZA Integrative Orthologymeiotic cell cycle process FBgn0001612
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPBC428.20c
GO:0022008
IEA
PLAZA Integrative Orthologyneurogenesis FBgn0001612
GO:0022603
IEA
PLAZA Integrative Orthologyregulation of anatomical structure morphogenesis SPBC428.20c
GO:0000212
IEA
PLAZA Integrative Orthologymeiotic spindle organization FBgn0001612
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process SPBC428.20c
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission SPBC428.20c
GO:0051321
IEA
PLAZA Integrative Orthologymeiotic cell cycle FBgn0001612
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality SPBC428.20c
GO:0048609
IEA
PLAZA Integrative Orthologymulticellular organismal reproductive process FBgn0001612
GO:0000902
IEA
PLAZA Integrative Orthologycell morphogenesis SPBC428.20c
GO:0007140
IEA
PLAZA Integrative Orthologymale meiotic nuclear division FBgn0001612
GO:0048731
IEA
PLAZA Integrative Orthologysystem development FBgn0001612
GO:0071963
IEA
PLAZA Integrative Orthologyestablishment or maintenance of cell polarity regulating cell shape SPBC428.20c
GO:0019953
IEA
PLAZA Integrative Orthologysexual reproduction FBgn0001612
GO:0090307
IEA
PLAZA Integrative Orthologymitotic spindle assembly SPBC428.20c
GO:0008360
IEA
PLAZA Integrative Orthologyregulation of cell shape SPBC428.20c
GO:1902850
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton organization involved in mitosis SPBC428.20c
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0001612
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development SPBC428.20c
GO:0007399
IEA
PLAZA Integrative Orthologynervous system development FBgn0001612
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis SPBC428.20c
GO:0007276
IEA
PLAZA Integrative Orthologygamete generation FBgn0001612
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPBC428.20c
GO:0051225
IEA
PLAZA Integrative Orthologyspindle assembly SPBC428.20c
GO:0032504
IEA
PLAZA Integrative Orthologymulticellular organism reproduction FBgn0001612
GO:0032989
IEA
PLAZA Integrative Orthologycellular component morphogenesis SPBC428.20c
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division SPBC428.20c
GO:0140014
IEA
PLAZA Integrative Orthologymitotic nuclear division SPBC428.20c
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process SPBC428.20c
GO:0140013
IEA
PLAZA Integrative Orthologymeiotic nuclear division FBgn0001612
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0001612
GO:0044703
IEA
PLAZA Integrative Orthologymulti-organism reproductive process FBgn0001612
GO:0007163
IEA
PLAZA Integrative Orthologyestablishment or maintenance of cell polarity SPBC428.20c
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process FBgn0001612
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process SPBC428.20c
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPBC428.20c
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction FBgn0001612
GO:0022412
IEA
PLAZA Integrative Orthologycellular process involved in reproduction in multicellular organism FBgn0001612
GO:0048232
IEA
PLAZA Integrative Orthologymale gamete generation FBgn0001612
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0001612
GO:0031122
IEA
PLAZA Integrative Orthologycytoplasmic microtubule organization SPBC428.20c

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043015
IEA
InterProgamma-tubulin binding
GO:0005515
IPI
Gene Ontologyprotein binding7 8 9 10 11 12
GO:0015631
ISS
Gene Ontologytubulin binding1 2
GO:0005198
IEA
PLAZA Integrative Orthologystructural molecule activity YNL126W
GO:0005200
IEA
PLAZA Integrative Orthologystructural constituent of cytoskeleton YNL126W
GO:0051011
IEA
PLAZA Integrative Orthologymicrotubule minus-end binding FBgn0001612
GO:0008017
IEA
PLAZA Integrative Orthologymicrotubule binding FBgn0001612

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000922
IEA
InterProspindle pole
GO:0005815
IEA
InterPromicrotubule organizing center
GO:0005819
IDA
Gene Ontologyspindle11 12
GO:0000930
IDA
Gene Ontologygamma-tubulin complex11 12
GO:0005938
IDA
Gene Ontologycell cortex3 4 5 6
GO:0005874
IDA
Gene Ontologymicrotubule3 4
GO:0055028
IDA
Gene Ontologycortical microtubule5 6
GO:0005737
IDA
Gene Ontologycytoplasm5 6
GO:0009898
IDA
Gene Ontologycytoplasmic side of plasma membrane1 2
GO:0005635
IDA
Gene Ontologynuclear envelope1 2
GO:0061496
IEA
PLAZA Integrative Orthologyhalf bridge of mitotic spindle pole body SPBC428.20c
GO:0061497
IEA
PLAZA Integrative Orthologyinner plaque of mitotic spindle pole body SPBC428.20c
GO:0005822
IEA
PLAZA Integrative Orthologyinner plaque of spindle pole body SPBC428.20c
GO:0005824
IEA
PLAZA Integrative Orthologyouter plaque of spindle pole body YNL126W
GO:0005825
IEA
PLAZA Integrative Orthologyhalf bridge of spindle pole body SPBC428.20c
GO:0005827
IEA
PLAZA Integrative Orthologypolar microtubule ENSG00000126216
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPBC428.20c
GO:0008275
IEA
PLAZA Integrative Orthologygamma-tubulin small complex YNL126W
GO:0005876
IEA
PLAZA Integrative Orthologyspindle microtubule ENSG00000126216
GO:0032155
IEA
PLAZA Integrative Orthologycell division site part SPBC428.20c
GO:0032153
IEA
PLAZA Integrative Orthologycell division site SPBC428.20c
GO:0044732
IEA
PLAZA Integrative Orthologymitotic spindle pole body SPBC428.20c
GO:0072686
IEA
PLAZA Integrative Orthologymitotic spindle FBgn0001612
GO:0071957
IEA
PLAZA Integrative Orthologyold mitotic spindle pole body SPBC428.20c
GO:0000928
IEA
PLAZA Integrative Orthologygamma-tubulin small complex, spindle pole body YNL126W
GO:0000923
IEA
PLAZA Integrative Orthologyequatorial microtubule organizing center SPBC428.20c
GO:0005813
IEA
PLAZA Integrative Orthologycentrosome ENSG00000126216
GO:0005814
IEA
PLAZA Integrative Orthologycentriole ENSG00000126216
GO:0005816
IEA
PLAZA Integrative Orthologyspindle pole body SPBC428.20c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007259Gamma-tubulin complex component protein

No MapMan annotations defined for this gene.
KeggID Description
K16570TUBGCP3, GCP3; gamma-tubulin complex component 3
No chloroplast target sequence found.