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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte344330
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte344330
Paramecium tetraurelia
0.0e+00
1665.2
877
100.0
pte73500
Paramecium tetraurelia
0.0e+00
1570.4
877
92.2
pte263930
Paramecium tetraurelia
1.1e-181
638.6
909
40.4
pte316560
Paramecium tetraurelia
4.5e-175
616.7
856
40.1
ENSG00000126216
Homo sapiens
3.3e-69
265.0
701
28.1
AT5G06680
Arabidopsis thaliana
2.9e-65
251.9
659
26.7
Pp3c20_16750
Physcomitrella patens
1.1e-64
250.0
684
26.9
gsu85750
Galdieria sulphuraria
3.2e-64
248.4
608
29.1
Pp3c24_16220
Physcomitrella patens
1.6e-63
246.1
690
26.4
SPBC428.20c
Schizosaccharomyces pombe
6.5e-57
224.2
761
27.2
FBgn0001612
Drosophila melanogaster
4.2e-40
168.3
668
24.7
emh763790
Emiliania huxleyi
2.6e-37
159.1
588
24.7
ptri173770
Phaeodactylum tricornutum
6.3e-36
154.5
618
23.9
Naga_100060g14
Nannochloropsis gaditana
1.4e-35
153.3
541
26.1
Ec-01_012030
Ectocarpus siliculosus
2.0e-34
149.4
399
28.3
ps00G07860
Pseudo-nitzschia multiseries
6.5e-33
144.4
746
23.6
Cre11.g467745
Chlamydomonas reinhardtii
9.4e-32
140.6
625
21.8
fso116280
Fistulifera solaris
3.6e-31
138.7
551
25.4
gene13257
Fragilariopsis cylindrus
4.7e-31
138.3
599
24.7
tps174470
Thalassiosira pseudonana
1.0e-30
137.1
736
22.3
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
1.4e-30
136.7
651
23.8
fso25450
Fistulifera solaris
8.8e-30
134.0
608
23.5
CC00G49290
Cyclotella cryptica
4.8e-28
128.3
722
22.3
AT5G17410
Arabidopsis thaliana
7.0e-27
124.4
582
22.0
sya00G96190
Synedra acus
1.7e-25
119.8
517
23.2
ENSG00000130640
Homo sapiens
2.9e-25
119.0
583
22.5
FBgn0026430
Drosophila melanogaster
8.5e-25
117.5
508
23.6
Pp3c8_20000
Physcomitrella patens
8.8e-22
107.5
543
20.8
sya00G73720
Synedra acus
9.7e-21
104.0
566
23.9
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
4.8e-20
101.7
598
19.9
YNL126W
Saccharomyces cerevisiae strain S288C
8.3e-20
100.9
551
23.6
ps00G06430
Pseudo-nitzschia multiseries
4.1e-19
98.6
612
21.4
pte710980
Paramecium tetraurelia
1.2e-18
97.1
534
21.2
gene13733
Fragilariopsis cylindrus
1.6e-18
96.7
597
20.3
Pp3c13_20568
Physcomitrella patens
1.6e-18
96.7
582
20.6
Pp3c13_20560
Physcomitrella patens
1.6e-18
96.7
582
20.6
Pp3c8_15910
Physcomitrella patens
8.0e-15
84.3
234
25.6
fso30500
Fistulifera solaris
8.8e-14
80.9
634
22.1
Sro101_g051510
Seminavis robusta
2.6e-13
79.3
305
25.9
fso119530
Fistulifera solaris
1.3e-12
77.0
636
23.3
AT3G53760
Arabidopsis thaliana
1.8e-11
73.2
272
23.5
Pp3c14_20420
Physcomitrella patens
2.0e-10
69.7
231
21.2
Ec-01_012010
Ectocarpus siliculosus
8.6e-09
64.3
166
28.9
Ec-20_003870
Ectocarpus siliculosus
3.3e-08
62.4
278
23.4
CC00G57600
Cyclotella cryptica
8.0e-07
57.8
477
21.0
AT1G80260
Arabidopsis thaliana
1.4e-06
57.0
246
21.1
ENSG00000275835
Homo sapiens
1.4e-06
57.0
379
20.1
ENSG00000276856
Homo sapiens
1.4e-06
57.0
379
20.1
SPBC365.15
Schizosaccharomyces pombe
5.2e-06
55.1
421
20.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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