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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu47780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu47780
Galdieria sulphuraria
4.4e-171
602.1
306
100.0
AT2G21270
Arabidopsis thaliana
1.8e-60
234.6
175
58.9
Pp3c10_2500
Physcomitrella patens
9.1e-60
232.3
180
58.3
AT4G38930
Arabidopsis thaliana
5.0e-58
226.5
175
56.6
AT2G29070
Arabidopsis thaliana
5.3e-52
206.5
282
40.1
Cre14.g613350
Chlamydomonas reinhardtii
9.1e-52
205.7
178
53.4
fso159120
Fistulifera solaris
1.0e-50
202.2
212
50.5
ps00G103890
Pseudo-nitzschia multiseries
1.0e-50
202.2
187
51.3
fso93250
Fistulifera solaris
2.9e-50
200.7
202
51.5
Ec-28_003200
Ectocarpus siliculosus
8.5e-50
199.1
172
53.5
ptri174840
Phaeodactylum tricornutum
1.1e-49
198.7
213
48.8
Sro176_g077410
Seminavis robusta
1.5e-49
198.4
212
46.2
gene8683
Fragilariopsis cylindrus
4.7e-48
193.4
190
49.5
tps123690
Thalassiosira pseudonana
1.8e-47
191.4
172
51.7
sya00G96560
Synedra acus
2.3e-47
191.0
238
43.7
ccr145320
Chondrus crispus
8.8e-47
189.1
260
45.8
AA0007G00730
Aureococcus anophagefferens
7.5e-46
186.0
193
45.1
FBgn0036136
Drosophila melanogaster
9.8e-46
185.7
212
43.9
ENSG00000070010
Homo sapiens
2.7e-43
177.6
301
36.5
emh350860
Emiliania huxleyi
4.5e-43
176.8
201
45.8
CM11G00080
Cyanidioschyzon merolae
7.7e-43
176.0
196
42.9
SPBC16A3.09c
Schizosaccharomyces pombe
6.1e-40
166.4
233
39.5
emh497110
Emiliania huxleyi
1.8e-39
164.9
160
49.4
YGR048W
Saccharomyces cerevisiae strain S288C
3.4e-38
160.6
212
44.3
WBGene00006733
Caenorhabditis elegans
1.8e-36
154.8
156
48.1
CC00G176170
Cyclotella cryptica
1.6e-35
151.8
139
50.4
PSNMU-V1.4_AUG-EV-PASAV3_0027570
Pseudo-nitzschia multistriata
7.8e-35
149.4
153
48.4
pte400290
Paramecium tetraurelia
3.4e-30
134.0
193
37.3
pte30790
Paramecium tetraurelia
4.9e-29
130.2
179
38.0
gene7868
Fragilariopsis cylindrus
4.7e-24
113.6
218
33.0
Ec-05_005270
Ectocarpus siliculosus
1.5e-22
108.6
176
30.7
emh366940
Emiliania huxleyi
4.4e-22
107.1
164
34.1
Naga_101372g2
Nannochloropsis gaditana
6.4e-21
103.2
112
46.4
pte609860
Paramecium tetraurelia
8.3e-21
102.8
176
34.7
Pp3c3_2100
Physcomitrella patens
6.0e-19
96.7
193
29.0
AT4G15420
Arabidopsis thaliana
8.6e-18
92.8
173
32.4
emh377310
Emiliania huxleyi
1.1e-17
92.4
164
32.3
CC00G82780
Cyclotella cryptica
1.2e-16
89.0
193
28.0
ptri42150
Phaeodactylum tricornutum
3.6e-16
87.4
211
28.0
Ec-01_005490
Ectocarpus siliculosus
6.2e-16
86.7
189
27.5
tps129610
Thalassiosira pseudonana
8.1e-16
86.3
203
28.1
PSNMU-V1.4_AUG-EV-PASAV3_0087560
Pseudo-nitzschia multistriata
6.8e-15
83.2
207
27.1
ps00G100850
Pseudo-nitzschia multiseries
6.8e-15
83.2
195
25.6
sya00G239170
Synedra acus
1.2e-14
82.4
124
31.5
gene13983
Fragilariopsis cylindrus
1.3e-13
79.0
200
26.0
fso119830
Fistulifera solaris
2.2e-13
78.2
197
26.4
fso120530
Fistulifera solaris
6.4e-13
76.6
186
25.8
Ec-06_003840
Ectocarpus siliculosus
1.4e-12
75.5
208
25.5
Sro333_g119660
Seminavis robusta
3.2e-12
74.3
241
23.7
tho368400
Thalassiosira oceanica
7.1e-12
73.2
123
30.9
Naga_100060g17
Nannochloropsis gaditana
1.7e-10
68.6
225
23.6
CC00G88950
Cyclotella cryptica
2.5e-09
64.7
49
57.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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