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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene3187
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene3187
Fragilariopsis cylindrus
1.1e-81
303.9
145
100.0
ps00G78480
Pseudo-nitzschia multiseries
7.9e-53
208.0
141
71.6
ptri21940
Phaeodactylum tricornutum
1.8e-33
143.7
146
48.6
Sro555_g165810
Seminavis robusta
1.6e-29
130.6
169
44.4
fso180370
Fistulifera solaris
6.3e-26
118.6
140
43.6
fso184970
Fistulifera solaris
2.4e-25
116.7
150
39.3
sya00G205170
Synedra acus
7.0e-25
115.2
130
46.2
fso168420
Fistulifera solaris
1.2e-24
114.4
127
46.5
sya00G264280
Synedra acus
1.6e-24
114.0
139
45.3
Sro107_g054050
Seminavis robusta
5.9e-24
112.1
129
45.0
sya00G256570
Synedra acus
7.7e-24
111.7
131
45.0
CC00G57010
Cyclotella cryptica
1.0e-23
111.3
128
43.0
tho196600
Thalassiosira oceanica
1.7e-23
110.5
128
43.0
ptri229170
Phaeodactylum tricornutum
2.2e-23
110.2
139
39.6
fso151960
Fistulifera solaris
2.9e-23
109.8
127
46.5
ptri32460
Phaeodactylum tricornutum
1.5e-22
107.5
127
44.1
tps71590
Thalassiosira pseudonana
1.5e-22
107.5
128
41.4
tho20540
Thalassiosira oceanica
1.9e-22
107.1
138
37.7
sya00G43360
Synedra acus
2.5e-22
106.7
128
43.0
fso33230
Fistulifera solaris
3.2e-22
106.3
127
42.5
fso54280
Fistulifera solaris
1.4e-20
100.9
128
40.6
fso123550
Fistulifera solaris
1.4e-20
100.9
128
40.6
Sro1228_g254370
Seminavis robusta
5.2e-20
99.0
127
40.2
CC00G168640
Cyclotella cryptica
1.2e-19
97.8
137
37.2
gene6749
Fragilariopsis cylindrus
2.6e-19
96.7
127
39.4
CC00G196020
Cyclotella cryptica
3.4e-19
96.3
128
39.1
ptri223580
Phaeodactylum tricornutum
3.4e-19
96.3
128
39.1
gene9793
Fragilariopsis cylindrus
4.4e-19
95.9
127
40.2
ps00G155910
Pseudo-nitzschia multiseries
5.7e-19
95.5
127
40.2
tho194020
Thalassiosira oceanica
1.3e-18
94.4
128
39.8
tps38520
Thalassiosira pseudonana
1.3e-18
94.4
128
39.8
gene13799
Fragilariopsis cylindrus
2.8e-18
93.2
139
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0005510
Pseudo-nitzschia multistriata
2.8e-18
93.2
133
39.1
tho592300
Thalassiosira oceanica
3.7e-18
92.8
128
41.4
ps00G185300
Pseudo-nitzschia multiseries
4.9e-18
92.4
133
39.1
tps150290
Thalassiosira pseudonana
4.9e-18
92.4
128
38.3
Sro506_g156280
Seminavis robusta
6.3e-18
92.0
128
39.1
sya00G17600
Synedra acus
1.4e-17
90.9
128
37.5
tps170450
Thalassiosira pseudonana
1.4e-17
90.9
127
38.6
ps00G135050
Pseudo-nitzschia multiseries
1.8e-17
90.5
128
36.7
tho132960
Thalassiosira oceanica
7.0e-17
88.6
131
40.5
gene16545
Fragilariopsis cylindrus
1.2e-16
87.8
126
38.1
sya00G117100
Synedra acus
1.6e-16
87.4
133
36.1
sya00G156000
Synedra acus
1.6e-16
87.4
137
39.4
CC00G125810
Cyclotella cryptica
2.0e-16
87.0
129
33.3
gene7436
Fragilariopsis cylindrus
2.0e-16
87.0
128
36.7
ps00G168960
Pseudo-nitzschia multiseries
2.0e-16
87.0
126
37.3
ptri158990
Phaeodactylum tricornutum
2.7e-16
86.7
132
39.4
PSNMU-V1.4_AUG-EV-PASAV3_0081540
Pseudo-nitzschia multistriata
4.5e-16
85.9
128
39.1
Sro776_g200900
Seminavis robusta
4.5e-16
85.9
128
34.4
sya00G52670
Synedra acus
4.5e-16
85.9
126
37.3
fso89100
Fistulifera solaris
5.9e-16
85.5
128
39.1
sya00G25330
Synedra acus
5.9e-16
85.5
133
35.3
ps00G192350
Pseudo-nitzschia multiseries
1.3e-15
84.3
128
38.3
sya00G12100
Synedra acus
1.7e-15
84.0
126
34.1
CC00G113840
Cyclotella cryptica
2.3e-15
83.6
129
37.2
fso08560
Fistulifera solaris
2.3e-15
83.6
128
39.8
PSNMU-V1.4_AUG-EV-PASAV3_0074230
Pseudo-nitzschia multistriata
2.3e-15
83.6
126
36.5
ptri228830
Phaeodactylum tricornutum
2.9e-15
83.2
126
39.7
Sro1294_g260200
Seminavis robusta
2.9e-15
83.2
126
36.5
tps109520
Thalassiosira pseudonana
2.9e-15
83.2
148
33.1
fso179420
Fistulifera solaris
5.0e-15
82.4
133
36.1
Sro176_g077270
Seminavis robusta
5.0e-15
82.4
130
35.4
gene14534
Fragilariopsis cylindrus
8.6e-15
81.6
132
38.6
gene516
Fragilariopsis cylindrus
8.6e-15
81.6
132
38.6
ps00G49760
Pseudo-nitzschia multiseries
1.1e-14
81.3
142
33.8
Sro458_g147090
Seminavis robusta
1.1e-14
81.3
128
40.6
ptri223660
Phaeodactylum tricornutum
1.9e-14
80.5
129
34.9
Sro718_g192230
Seminavis robusta
1.9e-14
80.5
128
35.2
fso54300
Fistulifera solaris
2.5e-14
80.1
126
35.7
Sro756_g197840
Seminavis robusta
2.5e-14
80.1
131
36.6
Sro1353_g265400
Seminavis robusta
3.3e-14
79.7
131
35.1
tps170710
Thalassiosira pseudonana
3.3e-14
79.7
129
33.3
PSNMU-V1.4_AUG-EV-PASAV3_0095090
Pseudo-nitzschia multistriata
4.3e-14
79.3
129
38.8
PSNMU-V1.4_AUG-EV-PASAV3_0062130
Pseudo-nitzschia multistriata
4.3e-14
79.3
127
35.4
Sro245_g097390
Seminavis robusta
4.3e-14
79.3
128
38.3
tho314880
Thalassiosira oceanica
4.3e-14
79.3
142
31.7
sya00G230590
Synedra acus
5.6e-14
79.0
129
34.1
fso184000
Fistulifera solaris
9.5e-14
78.2
133
34.6
ptri226930
Phaeodactylum tricornutum
9.5e-14
78.2
132
34.8
fso123570
Fistulifera solaris
1.2e-13
77.8
125
36.0
CC00G198070
Cyclotella cryptica
2.1e-13
77.0
128
35.2
Sro776_g200870
Seminavis robusta
2.1e-13
77.0
128
33.6
ps00G01920
Pseudo-nitzschia multiseries
2.8e-13
76.6
147
32.0
gene16432
Fragilariopsis cylindrus
3.6e-13
76.3
128
35.2
ps00G174510
Pseudo-nitzschia multiseries
3.6e-13
76.3
130
36.9
sya00G53380
Synedra acus
4.7e-13
75.9
143
35.0
Sro299_g111340
Seminavis robusta
6.1e-13
75.5
145
30.3
sya00G242440
Synedra acus
6.1e-13
75.5
128
35.9
PSNMU-V1.4_AUG-EV-PASAV3_0066060
Pseudo-nitzschia multistriata
8.0e-13
75.1
153
31.4
Sro3210_g345280
Seminavis robusta
8.0e-13
75.1
132
35.6
Sro299_g111270
Seminavis robusta
8.0e-13
75.1
132
35.6
sya00G128810
Synedra acus
8.0e-13
75.1
127
36.2
fso109690
Fistulifera solaris
1.0e-12
74.7
126
38.9
PSNMU-V1.4_AUG-EV-PASAV3_0030110
Pseudo-nitzschia multistriata
1.0e-12
74.7
147
31.3
tps118120
Thalassiosira pseudonana
1.0e-12
74.7
127
32.3
fso98040
Fistulifera solaris
1.8e-12
73.9
130
33.8
fso113910
Fistulifera solaris
1.8e-12
73.9
143
34.3
ptri211550
Phaeodactylum tricornutum
2.3e-12
73.6
141
34.8
tps211660
Thalassiosira pseudonana
3.0e-12
73.2
128
35.9
fso11540
Fistulifera solaris
4.0e-12
72.8
143
33.6
gene6405
Fragilariopsis cylindrus
5.2e-12
72.4
143
32.9
fso39760
Fistulifera solaris
6.8e-12
72.0
126
37.3
fso62790
Fistulifera solaris
6.8e-12
72.0
130
33.8
tps97340
Thalassiosira pseudonana
8.9e-12
71.6
127
33.9
tps105860
Thalassiosira pseudonana
8.9e-12
71.6
128
35.2
Sro1512_g278790
Seminavis robusta
2.0e-11
70.5
130
36.9
CC00G96200
Cyclotella cryptica
2.6e-11
70.1
142
30.3
tps29430
Thalassiosira pseudonana
2.6e-11
70.1
126
35.7
Sro748_g196620
Seminavis robusta
3.4e-11
69.7
130
35.4
Sro560_g166640
Seminavis robusta
3.4e-11
69.7
130
32.3
tps144100
Thalassiosira pseudonana
3.4e-11
69.7
149
30.9
ptri21090
Phaeodactylum tricornutum
5.7e-11
68.9
128
37.5
Sro1015_g231520
Seminavis robusta
5.7e-11
68.9
140
35.0
sya00G242400
Synedra acus
7.5e-11
68.6
126
29.4
tps209500
Thalassiosira pseudonana
7.5e-11
68.6
140
34.3
CC00G13180
Cyclotella cryptica
1.3e-10
67.8
143
34.3
Sro844_g209850
Seminavis robusta
1.3e-10
67.8
133
32.3
Sro57_g033130
Seminavis robusta
1.3e-10
67.8
133
32.3
tps29530
Thalassiosira pseudonana
1.3e-10
67.8
128
35.2
tho222020
Thalassiosira oceanica
1.7e-10
67.4
128
32.0
tps31050
Thalassiosira pseudonana
1.7e-10
67.4
131
35.1
tps31090
Thalassiosira pseudonana
1.7e-10
67.4
131
35.1
ptri09700
Phaeodactylum tricornutum
2.2e-10
67.0
133
30.8
tho224000
Thalassiosira oceanica
2.2e-10
67.0
122
34.4
tps169550
Thalassiosira pseudonana
3.7e-10
66.2
127
33.1
CC00G139230
Cyclotella cryptica
4.9e-10
65.9
138
31.9
tho256100
Thalassiosira oceanica
4.9e-10
65.9
123
35.0
tps126430
Thalassiosira pseudonana
4.9e-10
65.9
130
29.2
fso125600
Fistulifera solaris
6.4e-10
65.5
127
33.9
tho102120
Thalassiosira oceanica
8.3e-10
65.1
125
31.2
CC00G47830
Cyclotella cryptica
1.1e-09
64.7
128
32.0
CC00G79300
Cyclotella cryptica
1.1e-09
64.7
128
32.0
fso90480
Fistulifera solaris
1.1e-09
64.7
127
33.9
tps105880
Thalassiosira pseudonana
1.1e-09
64.7
134
32.8
Sro1087_g239840
Seminavis robusta
1.4e-09
64.3
128
32.8
tho110160
Thalassiosira oceanica
1.4e-09
64.3
134
29.9
sya00G02940
Synedra acus
2.4e-09
63.5
130
32.3
tps64700
Thalassiosira pseudonana
2.4e-09
63.5
141
26.2
CC00G09230
Cyclotella cryptica
3.2e-09
63.2
127
34.6
gene20940
Fragilariopsis cylindrus
3.2e-09
63.2
124
29.8
gene10181
Fragilariopsis cylindrus
3.2e-09
63.2
124
29.8
tps32140
Thalassiosira pseudonana
3.2e-09
63.2
130
30.0
PSNMU-V1.4_AUG-EV-PASAV3_0054510
Pseudo-nitzschia multistriata
5.4e-09
62.4
124
30.6
CC00G32860
Cyclotella cryptica
7.0e-09
62.0
128
29.7
CC00G82150
Cyclotella cryptica
7.0e-09
62.0
78
41.0
CC00G152580
Cyclotella cryptica
7.0e-09
62.0
128
29.7
Sro672_g185130
Seminavis robusta
7.0e-09
62.0
132
30.3
Sro299_g111520
Seminavis robusta
7.0e-09
62.0
127
33.9
tps192360
Thalassiosira pseudonana
7.0e-09
62.0
128
29.7
tps217010
Thalassiosira pseudonana
7.0e-09
62.0
78
42.3
AA0017G01530
Aureococcus anophagefferens
9.2e-09
61.6
128
29.7
CC00G172280
Cyclotella cryptica
1.6e-08
60.8
127
29.9
CC00G64720
Cyclotella cryptica
2.0e-08
60.5
132
31.1
sya00G242410
Synedra acus
2.0e-08
60.5
110
35.5
Sro975_g226830
Seminavis robusta
2.7e-08
60.1
134
29.1
tho66420
Thalassiosira oceanica
2.7e-08
60.1
139
30.9
CC00G51700
Cyclotella cryptica
5.9e-08
58.9
122
29.5
gene10828
Fragilariopsis cylindrus
7.8e-08
58.5
125
31.2
gene17789
Fragilariopsis cylindrus
7.8e-08
58.5
126
27.0
fso15630
Fistulifera solaris
7.8e-08
58.5
126
32.5
CC00G122630
Cyclotella cryptica
1.3e-07
57.8
142
26.8
ps00G96090
Pseudo-nitzschia multiseries
1.7e-07
57.4
128
29.7
tho332820
Thalassiosira oceanica
3.0e-07
56.6
124
29.8
tps120810
Thalassiosira pseudonana
3.0e-07
56.6
128
24.2
Sro374_g129180
Seminavis robusta
3.9e-07
56.2
141
28.4
sya00G05790
Synedra acus
3.9e-07
56.2
122
30.3
Sro299_g111510
Seminavis robusta
5.0e-07
55.8
129
33.3
AA0012G01350
Aureococcus anophagefferens
6.6e-07
55.5
127
29.9
CC00G175600
Cyclotella cryptica
2.5e-06
53.5
128
27.3
fso143640
Fistulifera solaris
2.5e-06
53.5
126
31.0
gene7254
Fragilariopsis cylindrus
3.3e-06
53.1
132
32.6
gene20804
Fragilariopsis cylindrus
5.6e-06
52.4
131
26.7
tho25160
Thalassiosira oceanica
9.5e-06
51.6
138
26.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (11 genes)
Thalassiosira pseudonana (24 genes)
Thalassiosira oceanica (14 genes)
Pseudo-nitzschia multiseries (10 genes)
Fistulifera solaris (23 genes)
Fragilariopsis cylindrus (16 genes)
Cyclotella cryptica (20 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (28 genes)
Synedra acus (18 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (8 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing