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Functional clusters
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso78880
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso78880
Fistulifera solaris
2.6e-268
925.6
498
100.0
fso162020
Fistulifera solaris
1.2e-265
916.8
498
98.8
ptri242330
Phaeodactylum tricornutum
1.3e-190
667.5
503
71.2
PSNMU-V1.4_AUG-EV-PASAV3_0095480
Pseudo-nitzschia multistriata
2.6e-172
606.7
538
59.7
ps00G28970
Pseudo-nitzschia multiseries
1.3e-171
604.4
521
63.3
Sro589_g171680
Seminavis robusta
1.9e-167
590.5
504
61.9
gene13157
Fragilariopsis cylindrus
2.0e-156
553.9
455
66.2
CC00G57940
Cyclotella cryptica
3.2e-154
546.6
507
58.8
sya00G265990
Synedra acus
1.8e-152
540.8
493
61.9
tps65250
Thalassiosira pseudonana
2.9e-139
496.9
397
62.5
Ec-16_002010
Ectocarpus siliculosus
3.1e-112
407.1
427
49.6
AA0001G03340
Aureococcus anophagefferens
1.4e-109
398.3
479
48.2
Ec-28_000800
Ectocarpus siliculosus
2.3e-107
391.0
458
47.2
gsu96170
Galdieria sulphuraria
9.5e-106
385.6
493
45.4
FBgn0001086
Drosophila melanogaster
7.1e-101
369.4
475
44.8
Pp3c2_10200
Physcomitrella patens
4.6e-100
366.7
393
50.1
Pp3c21_3140
Physcomitrella patens
9.9e-95
349.0
441
44.2
tho121140
Thalassiosira oceanica
1.7e-94
348.2
353
49.9
fso00590
Fistulifera solaris
1.4e-93
345.1
444
43.7
CC00G44130
Cyclotella cryptica
3.2e-93
344.0
366
48.6
ENSG00000117399
Homo sapiens
3.2e-93
344.0
439
43.5
fso134580
Fistulifera solaris
7.1e-93
342.8
447
43.2
tps27090
Thalassiosira pseudonana
7.1e-93
342.8
438
43.2
Pp3c8_6330
Physcomitrella patens
9.2e-93
342.4
445
44.5
Pp3c1_28980
Physcomitrella patens
3.9e-91
337.0
404
47.0
Pp3c24_8550
Physcomitrella patens
7.3e-90
332.8
357
49.9
AT4G33270
Arabidopsis thaliana
1.8e-88
328.2
437
43.2
AT4G33260
Arabidopsis thaliana
4.0e-88
327.0
437
43.0
ptri125300
Phaeodactylum tricornutum
4.0e-88
327.0
445
42.5
PSNMU-V1.4_AUG-EV-PASAV3_0105680
Pseudo-nitzschia multistriata
1.3e-86
322.0
338
49.4
Cre09.g399911
Chlamydomonas reinhardtii
3.2e-85
317.4
426
44.4
Sro103_g052460
Seminavis robusta
9.3e-85
315.8
334
48.8
Cre09.g406851
Chlamydomonas reinhardtii
1.7e-83
311.6
345
46.7
AT4G11920
Arabidopsis thaliana
1.9e-82
308.1
436
40.6
AT4G22910
Arabidopsis thaliana
1.6e-81
305.1
450
39.6
gene428
Fragilariopsis cylindrus
2.8e-81
304.3
334
47.9
Pp3c4_1710
Physcomitrella patens
6.2e-81
303.1
327
46.8
AT5G27080
Arabidopsis thaliana
8.1e-81
302.8
439
41.2
ENSG00000105325
Homo sapiens
1.2e-79
298.9
453
38.4
Pp3c12_23740
Physcomitrella patens
2.6e-79
297.7
479
38.0
Pp3c10_18160
Physcomitrella patens
2.6e-79
297.7
474
38.6
FBgn0262699
Drosophila melanogaster
4.5e-79
297.0
439
39.6
AT5G27570
Arabidopsis thaliana
9.9e-79
295.8
413
41.4
emh414940
Emiliania huxleyi
1.3e-78
295.4
306
50.0
Naga_100321g1
Nannochloropsis gaditana
1.3e-78
295.4
365
45.5
SPAC144.13c
Schizosaccharomyces pombe
3.8e-78
293.9
314
44.9
AT5G26900
Arabidopsis thaliana
8.4e-78
292.7
439
40.5
CM17G02420
Cyanidioschyzon merolae
3.2e-77
290.8
359
42.6
Naga_100023g51
Nannochloropsis gaditana
3.2e-77
290.8
312
47.8
AT5G13840
Arabidopsis thaliana
9.3e-77
289.3
320
45.0
Pp3c3_34000
Physcomitrella patens
9.3e-77
289.3
466
36.9
pte306690
Paramecium tetraurelia
6.7e-75
283.1
309
45.6
fso195350
Fistulifera solaris
1.1e-72
275.8
453
37.3
WBGene00001510
Caenorhabditis elegans
3.1e-72
274.2
324
42.3
pte472800
Paramecium tetraurelia
4.0e-72
273.9
311
45.3
SPAC821.08c
Schizosaccharomyces pombe
4.0e-72
273.9
378
38.1
fso139640
Fistulifera solaris
2.0e-71
271.6
455
37.4
YGL003C
Saccharomyces cerevisiae strain S288C
5.8e-71
270.0
376
39.4
tps150750
Thalassiosira pseudonana
1.7e-70
268.5
319
46.1
Pp3c21_3130
Physcomitrella patens
2.9e-70
267.7
285
49.8
pte348600
Paramecium tetraurelia
2.9e-70
267.7
381
37.5
pte392450
Paramecium tetraurelia
8.4e-70
266.2
377
37.4
SPBC1198.12
Schizosaccharomyces pombe
1.4e-69
265.4
429
35.4
Pp3c21_1630
Physcomitrella patens
2.5e-69
264.6
286
47.2
FBgn0034937
Drosophila melanogaster
1.2e-68
262.3
356
40.4
pte611220
Paramecium tetraurelia
7.9e-68
259.6
375
36.5
pte293100
Paramecium tetraurelia
1.3e-67
258.8
375
36.3
CM01G01380
Cyanidioschyzon merolae
1.1e-66
255.8
371
39.1
sya00G85070
Synedra acus
1.6e-65
251.9
329
41.0
ps00G112390
Pseudo-nitzschia multiseries
3.7e-65
250.8
346
41.0
AT5G27945
Arabidopsis thaliana
5.3e-64
246.9
298
45.3
AA0003G01010
Aureococcus anophagefferens
2.9e-62
241.1
323
42.4
gsu94560
Galdieria sulphuraria
6.5e-62
240.0
332
41.0
ccr191300
Chondrus crispus
3.3e-58
227.6
233
49.8
YGL116W
Saccharomyces cerevisiae strain S288C
1.8e-56
221.9
433
34.6
emh289720
Emiliania huxleyi
4.2e-53
210.7
244
45.5
emh662650
Emiliania huxleyi
2.1e-52
208.4
425
32.0
emh343840
Emiliania huxleyi
2.1e-52
208.4
221
48.9
ENSG00000164287
Homo sapiens
3.6e-52
207.6
296
39.9
gene2402
Fragilariopsis cylindrus
7.9e-52
206.5
309
37.2
fso159510
Fistulifera solaris
1.4e-51
205.7
467
31.5
pte506460
Paramecium tetraurelia
2.3e-51
204.9
381
31.5
Sro1101_g241450
Seminavis robusta
8.8e-51
203.0
335
36.4
pte503430
Paramecium tetraurelia
2.0e-50
201.8
381
31.8
pte693190
Paramecium tetraurelia
2.0e-50
201.8
320
34.4
fso93020
Fistulifera solaris
2.5e-50
201.4
454
32.6
pte291360
Paramecium tetraurelia
5.7e-50
200.3
310
35.2
pte613120
Paramecium tetraurelia
5.7e-50
200.3
310
35.2
pte673500
Paramecium tetraurelia
7.4e-50
199.9
381
31.5
sya00G23420
Synedra acus
3.7e-49
197.6
309
35.9
ps00G182890
Pseudo-nitzschia multiseries
2.0e-47
191.8
309
42.4
fso92980
Fistulifera solaris
4.5e-47
190.7
351
33.3
ptri146850
Phaeodactylum tricornutum
1.0e-46
189.5
327
42.2
CC00G30990
Cyclotella cryptica
3.2e-45
184.5
316
34.8
PSNMU-V1.4_AUG-EV-PASAV3_0043280
Pseudo-nitzschia multistriata
4.2e-45
184.1
323
43.3
pte658260
Paramecium tetraurelia
5.5e-45
183.7
320
33.4
pte748280
Paramecium tetraurelia
7.2e-45
183.3
309
34.3
fso36200
Fistulifera solaris
1.0e-43
179.5
461
30.6
fso159790
Fistulifera solaris
2.0e-42
175.3
347
31.7
emh174370
Emiliania huxleyi
4.4e-42
174.1
286
38.5
fso159730
Fistulifera solaris
3.1e-40
167.9
335
33.4
pte749100
Paramecium tetraurelia
1.5e-39
165.6
309
29.4
tps22280
Thalassiosira pseudonana
2.2e-38
161.8
316
43.4
tps39620
Thalassiosira pseudonana
2.2e-38
161.8
316
43.4
pte707680
Paramecium tetraurelia
9.4e-37
156.4
417
25.2
sya00G43700
Synedra acus
3.6e-36
154.5
334
30.5
pte383100
Paramecium tetraurelia
6.1e-36
153.7
429
28.0
pte415590
Paramecium tetraurelia
6.1e-36
153.7
187
44.4
pte414460
Paramecium tetraurelia
1.0e-35
152.9
417
25.2
pte251190
Paramecium tetraurelia
3.0e-35
151.4
439
27.6
ccr147000
Chondrus crispus
1.1e-34
149.4
207
41.5
WBGene00001511
Caenorhabditis elegans
1.7e-33
145.6
357
29.1
pte708930
Paramecium tetraurelia
6.3e-33
143.7
309
30.4
pte592600
Paramecium tetraurelia
1.4e-32
142.5
424
25.7
pte712080
Paramecium tetraurelia
1.2e-31
139.4
456
25.0
SPCC1620.04c
Schizosaccharomyces pombe
2.3e-27
125.2
481
26.2
SPAC13G6.08
Schizosaccharomyces pombe
1.5e-26
122.5
226
35.4
pte07750
Paramecium tetraurelia
2.0e-26
122.1
134
44.8
emh447100
Emiliania huxleyi
4.8e-25
117.5
319
27.9
YGR225W
Saccharomyces cerevisiae strain S288C
1.1e-24
116.3
368
28.0
emh343860
Emiliania huxleyi
4.5e-23
110.9
130
43.8
emh32870
Emiliania huxleyi
1.3e-22
109.4
186
37.6
fso159430
Fistulifera solaris
3.2e-21
104.8
303
29.0
fso120220
Fistulifera solaris
1.3e-17
92.8
267
30.7
fso36170
Fistulifera solaris
3.7e-17
91.3
146
34.2
Pp3c18_20650
Physcomitrella patens
1.1e-16
89.7
131
41.2
fso92960
Fistulifera solaris
1.8e-16
89.0
192
33.3
fso36260
Fistulifera solaris
5.4e-16
87.4
135
34.1
AA0106G00010
Aureococcus anophagefferens
3.8e-14
81.3
52
71.2
FBgn0046222
Drosophila melanogaster
2.8e-12
75.1
168
32.7
ptri143190
Phaeodactylum tricornutum
1.4e-11
72.8
383
22.7
pte415610
Paramecium tetraurelia
3.4e-10
68.2
63
47.6
emh445900
Emiliania huxleyi
9.8e-10
66.6
178
31.5
WBGene00011051
Caenorhabditis elegans
1.4e-08
62.8
169
28.4
CM17G00500
Cyanidioschyzon merolae
9.2e-08
60.1
213
27.2
Sro440_g143540
Seminavis robusta
1.6e-07
59.3
467
22.9
tps45390
Thalassiosira pseudonana
1.6e-07
59.3
135
29.6
WBGene00021316
Caenorhabditis elegans
2.0e-07
58.9
162
27.2
Pp3c3_3110
Physcomitrella patens
2.7e-07
58.5
202
21.3
Cre17.g723450
Chlamydomonas reinhardtii
3.5e-07
58.2
162
28.4
AT5G50230
Arabidopsis thaliana
5.9e-07
57.4
167
26.9
fso134890
Fistulifera solaris
7.8e-07
57.0
265
25.7
Cre12.g526950
Chlamydomonas reinhardtii
1.0e-06
56.6
158
28.5
Pp3c23_13260
Physcomitrella patens
1.0e-06
56.6
126
29.4
fso30640
Fistulifera solaris
1.3e-06
56.2
171
25.7
fso119410
Fistulifera solaris
1.3e-06
56.2
171
25.7
fso159480
Fistulifera solaris
1.3e-06
56.2
363
21.8
Naga_100003g60
Nannochloropsis gaditana
1.7e-06
55.8
138
31.2
AA0007G03980
Aureococcus anophagefferens
2.3e-06
55.5
179
25.7
FBgn0034876
Drosophila melanogaster
2.3e-06
55.5
156
26.3
Pp3c15_21840
Physcomitrella patens
2.3e-06
55.5
266
22.2
tps197950
Thalassiosira pseudonana
2.3e-06
55.5
210
23.8
gsu06100
Galdieria sulphuraria
3.9e-06
54.7
120
28.3
gsu06120
Galdieria sulphuraria
3.9e-06
54.7
120
28.3
ENSG00000176871
Homo sapiens
3.9e-06
54.7
99
34.3
Naga_101173g2
Nannochloropsis gaditana
3.9e-06
54.7
161
30.4
AT1G49040
Arabidopsis thaliana
5.0e-06
54.3
149
28.2
AT5G08560
Arabidopsis thaliana
6.6e-06
53.9
90
30.0
CM20G05150
Cyanidioschyzon merolae
6.6e-06
53.9
167
27.5
Pp3c2_17710
Physcomitrella patens
6.6e-06
53.9
124
30.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (7 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (21 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (12 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (25 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (16 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing