Gene: AT5G50230 (Arabidopsis thaliana)

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Gene Identifier
AT5G50230
Transcript Identifier
AT5G50230.1
Gene Type
Coding gene
Location
5 : 20448632-20450855 : negative

Family Information

Homologous gene family
HOM02SEM003527
(22 genes in 17 species)
specific family

Descriptions

Description
Transducin/WD40 repeat-like superfamily protein
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Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007275
ISS
Gene Ontologymulticellular organism development1 2
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process FBgn0039705
GO:0012501
IEA
PLAZA Integrative Orthologyprogrammed cell death FBgn0039705
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0039705
GO:0044275
IEA
PLAZA Integrative Orthologycellular carbohydrate catabolic process FBgn0039705
GO:0048871
IEA
PLAZA Integrative Orthologymulticellular organismal homeostasis FBgn0039705
GO:0048872
IEA
PLAZA Integrative Orthologyhomeostasis of number of cells FBgn0039705
GO:0048873
IEA
PLAZA Integrative Orthologyhomeostasis of number of cells within a tissue FBgn0039705
GO:0009617
IEA
PLAZA Integrative Orthologyresponse to bacterium WBGene00019427
GO:0000002
IEA
PLAZA Integrative Orthologymitochondrial genome maintenance YJL112W
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0039705
GO:0009987
IEA
PLAZA Integrative Orthologycellular process YJL112W
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization YJL112W
GO:0048468
IEA
PLAZA Integrative Orthologycell development FBgn0039705
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process FBgn0039705
GO:0006112
IEA
PLAZA Integrative Orthologyenergy reserve metabolic process FBgn0039705
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process FBgn0039705
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process FBgn0039705
GO:0006073
IEA
PLAZA Integrative Orthologycellular glucan metabolic process FBgn0039705
GO:0015980
IEA
PLAZA Integrative Orthologyenergy derivation by oxidation of organic compounds FBgn0039705
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process FBgn0039705
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus WBGene00019427
GO:0035973
IEA
PLAZA Integrative Orthologyaggrephagy WBGene00019427
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress FBgn0039705
GO:0044264
IEA
PLAZA Integrative Orthologycellular polysaccharide metabolic process FBgn0039705
GO:0044262
IEA
PLAZA Integrative Orthologycellular carbohydrate metabolic process FBgn0039705
GO:0045595
IEA
PLAZA Integrative Orthologyregulation of cell differentiation FBgn0039705
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process FBgn0039705
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus WBGene00019427
GO:0009607
IEA
PLAZA Integrative Orthologyresponse to biotic stimulus WBGene00019427
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process FBgn0039705
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process FBgn0039705
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process FBgn0039705
GO:0007552
IEA
PLAZA Integrative Orthologymetamorphosis FBgn0039705
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process FBgn0039705
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process FBgn0039705
GO:0042594
IEA
PLAZA Integrative Orthologyresponse to starvation FBgn0039705
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process FBgn0039705
GO:0007031
IEA
PLAZA Integrative Orthologyperoxisome organization YJL112W
GO:0007154
IEA
PLAZA Integrative Orthologycell communication FBgn0039705
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process WBGene00019427
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process FBgn0039705
GO:0035069
IEA
PLAZA Integrative Orthologylarval midgut histolysis FBgn0039705
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process FBgn0039705
GO:0043207
IEA
PLAZA Integrative Orthologyresponse to external biotic stimulus WBGene00019427
GO:0031667
IEA
PLAZA Integrative Orthologyresponse to nutrient levels FBgn0039705
GO:0010623
IEA
PLAZA Integrative Orthologyprogrammed cell death involved in cell development FBgn0039705
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YJL112W
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YJL112W
GO:0010506
IEA
PLAZA Integrative Orthologyregulation of autophagy FBgn0039705
GO:0042592
IEA
PLAZA Integrative Orthologyhomeostatic process FBgn0039705
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process FBgn0039705
GO:0000272
IEA
PLAZA Integrative Orthologypolysaccharide catabolic process FBgn0039705
GO:0031669
IEA
PLAZA Integrative Orthologycellular response to nutrient levels FBgn0039705
GO:0031668
IEA
PLAZA Integrative Orthologycellular response to extracellular stimulus FBgn0039705
GO:0030855
IEA
PLAZA Integrative Orthologyepithelial cell differentiation FBgn0039705
GO:0098542
IEA
PLAZA Integrative Orthologydefense response to other organism WBGene00019427
GO:0000266
IEA
PLAZA Integrative Orthologymitochondrial fission YJL112W
GO:0009888
IEA
PLAZA Integrative Orthologytissue development FBgn0039705
GO:0042742
IEA
PLAZA Integrative Orthologydefense response to bacterium WBGene00019427
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process WBGene00019427
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process FBgn0039705
GO:0044247
IEA
PLAZA Integrative Orthologycellular polysaccharide catabolic process FBgn0039705
GO:0006497
IEA
PLAZA Integrative Orthologyprotein lipidation FBgn0039705
GO:0009886
IEA
PLAZA Integrative Orthologypost-embryonic animal morphogenesis FBgn0039705
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process WBGene00019427
GO:0006091
IEA
PLAZA Integrative Orthologygeneration of precursor metabolites and energy FBgn0039705
GO:0016559
IEA
PLAZA Integrative Orthologyperoxisome fission YJL112W
GO:0060033
IEA
PLAZA Integrative Orthologyanatomical structure regression FBgn0039705
GO:0016052
IEA
PLAZA Integrative Orthologycarbohydrate catabolic process FBgn0039705
GO:0006914
IEA
PLAZA Integrative Orthologyautophagy WBGene00019427
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission YJL112W
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process WBGene00019427
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process FBgn0039705
GO:0002165
IEA
PLAZA Integrative Orthologyinstar larval or pupal development FBgn0039705
GO:0009991
IEA
PLAZA Integrative Orthologyresponse to extracellular stimulus FBgn0039705
GO:0035883
IEA
PLAZA Integrative Orthologyenteroendocrine cell differentiation FBgn0039705
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process FBgn0039705
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process FBgn0039705
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process FBgn0039705
GO:0055114
IEA
PLAZA Integrative Orthologyoxidation-reduction process FBgn0039705
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus FBgn0039705
GO:0005977
IEA
PLAZA Integrative Orthologyglycogen metabolic process FBgn0039705
GO:0005975
IEA
PLAZA Integrative Orthologycarbohydrate metabolic process FBgn0039705
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process FBgn0039705
GO:0005976
IEA
PLAZA Integrative Orthologypolysaccharide metabolic process FBgn0039705
GO:0001894
IEA
PLAZA Integrative Orthologytissue homeostasis FBgn0039705
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress WBGene00019427
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization YJL112W
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification FBgn0039705
GO:0006952
IEA
PLAZA Integrative Orthologydefense response WBGene00019427
GO:0005980
IEA
PLAZA Integrative Orthologyglycogen catabolic process FBgn0039705
GO:0009267
IEA
PLAZA Integrative Orthologycellular response to starvation FBgn0039705
GO:0035096
IEA
PLAZA Integrative Orthologylarval midgut cell programmed cell death FBgn0039705
GO:0048707
IEA
PLAZA Integrative Orthologyinstar larval or pupal morphogenesis FBgn0039705
GO:0016236
IEA
PLAZA Integrative Orthologymacroautophagy WBGene00019427
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process WBGene00019427
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process FBgn0039705
GO:0061919
IEA
PLAZA Integrative Orthologyprocess utilizing autophagic mechanism WBGene00019427
GO:0060786
IEA
PLAZA Integrative Orthologyregulation of cell differentiation involved in tissue homeostasis FBgn0039705
GO:0002067
IEA
PLAZA Integrative Orthologyglandular epithelial cell differentiation FBgn0039705
GO:0042158
IEA
PLAZA Integrative Orthologylipoprotein biosynthetic process FBgn0039705
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process FBgn0039705
GO:0042157
IEA
PLAZA Integrative Orthologylipoprotein metabolic process FBgn0039705
GO:0060429
IEA
PLAZA Integrative Orthologyepithelium development FBgn0039705
GO:0002065
IEA
PLAZA Integrative Orthologycolumnar/cuboidal epithelial cell differentiation FBgn0039705
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis FBgn0039705
GO:0061912
IEA
PLAZA Integrative Orthologyselective autophagy WBGene00019427
GO:0051707
IEA
PLAZA Integrative Orthologyresponse to other organism WBGene00019427
GO:0009251
IEA
PLAZA Integrative Orthologyglucan catabolic process FBgn0039705
GO:0061723
IEA
PLAZA Integrative Orthologyglycophagy FBgn0039705
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality FBgn0039705
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation FBgn0039705
GO:0050830
IEA
PLAZA Integrative Orthologydefense response to Gram-positive bacterium WBGene00019427
GO:0071496
IEA
PLAZA Integrative Orthologycellular response to external stimulus FBgn0039705
GO:0044042
IEA
PLAZA Integrative Orthologyglucan metabolic process FBgn0039705
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process FBgn0039705
GO:0008219
IEA
PLAZA Integrative Orthologycell death FBgn0039705
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process FBgn0039705
GO:0060249
IEA
PLAZA Integrative Orthologyanatomical structure homeostasis FBgn0039705
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development FBgn0039705

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000166
ISS
Gene Ontologynucleotide binding3
GO:0032182
IEA
PLAZA Integrative Orthologyubiquitin-like protein binding YJL112W
GO:0043130
IEA
PLAZA Integrative Orthologyubiquitin binding YJL112W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005834
ISS
Gene Ontologyheterotrimeric G-protein complex3
GO:0005634
ISM
Gene Ontologynucleus4
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane YJL112W
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000168010
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane YJL112W
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YJL112W
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000168010
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part YJL112W
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000168010
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YJL112W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm YJL112W
GO:0031966
IEA
PLAZA Integrative Orthologymitochondrial membrane YJL112W
GO:0031968
IEA
PLAZA Integrative Orthologyorganelle outer membrane YJL112W
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope YJL112W
GO:0005740
IEA
PLAZA Integrative Orthologymitochondrial envelope YJL112W
GO:0005741
IEA
PLAZA Integrative Orthologymitochondrial outer membrane YJL112W
GO:0019867
IEA
PLAZA Integrative Orthologyouter membrane YJL112W
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope YJL112W
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000168010
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000168010
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle YJL112W
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YJL112W
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YJL112W
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000168010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR001680WD40 repeat
IPR013923Autophagy-related protein 16
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

No MapMan annotations defined for this gene.
KeggID Description
K17890ATG16L1; autophagy-related protein 16-1
No chloroplast target sequence found.