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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso25450
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso25450
Fistulifera solaris
0.0e+00
1565.1
788
100.0
fso116280
Fistulifera solaris
0.0e+00
1454.5
789
92.5
ptri173770
Phaeodactylum tricornutum
3.6e-168
593.6
765
44.7
gene13257
Fragilariopsis cylindrus
9.9e-158
558.9
779
42.4
ps00G07860
Pseudo-nitzschia multiseries
4.3e-153
543.5
775
40.8
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
1.8e-151
538.1
764
40.7
Sro101_g051510
Seminavis robusta
6.1e-139
496.5
855
39.3
CC00G49290
Cyclotella cryptica
9.2e-95
349.7
744
31.9
tps174470
Thalassiosira pseudonana
3.1e-90
334.7
760
30.8
sya00G96190
Synedra acus
9.9e-73
276.6
505
35.0
Pp3c20_16750
Physcomitrella patens
1.4e-55
219.5
801
25.8
Pp3c24_16220
Physcomitrella patens
7.1e-55
217.2
681
27.3
AT5G06680
Arabidopsis thaliana
1.3e-53
213.0
715
26.4
ENSG00000126216
Homo sapiens
2.4e-50
202.2
682
26.1
gsu85750
Galdieria sulphuraria
4.5e-49
198.0
661
26.9
Naga_100060g14
Nannochloropsis gaditana
9.9e-49
196.8
507
30.0
pte263930
Paramecium tetraurelia
3.8e-40
168.3
606
25.6
SPBC428.20c
Schizosaccharomyces pombe
2.5e-39
165.6
573
26.9
pte316560
Paramecium tetraurelia
3.2e-39
165.2
606
24.8
FBgn0001612
Drosophila melanogaster
5.5e-39
164.5
664
25.6
pte344330
Paramecium tetraurelia
3.4e-33
145.2
608
23.5
emh763790
Emiliania huxleyi
4.5e-33
144.8
490
27.1
pte73500
Paramecium tetraurelia
2.5e-31
139.0
615
23.1
Cre11.g467745
Chlamydomonas reinhardtii
1.2e-30
136.7
752
23.9
Pp3c23_1190
Physcomitrella patens
1.3e-24
116.7
509
23.4
Pp3c8_20000
Physcomitrella patens
1.3e-24
116.7
509
23.6
Ec-01_012030
Ectocarpus siliculosus
2.9e-24
115.5
439
26.7
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
7.2e-23
110.9
595
23.0
ENSG00000130640
Homo sapiens
9.4e-23
110.5
505
23.8
AT5G17410
Arabidopsis thaliana
2.1e-22
109.4
647
22.4
ptri91750
Phaeodactylum tricornutum
3.1e-18
95.5
630
23.2
FBgn0026430
Drosophila melanogaster
9.1e-18
94.0
549
20.2
Pp3c14_20420
Physcomitrella patens
2.6e-17
92.4
551
23.0
ps00G06430
Pseudo-nitzschia multiseries
3.4e-17
92.0
602
22.3
sya00G73720
Synedra acus
1.3e-16
90.1
506
23.3
Pp3c13_20568
Physcomitrella patens
6.5e-16
87.8
526
22.6
Pp3c13_20560
Physcomitrella patens
6.5e-16
87.8
526
22.6
SPBC365.15
Schizosaccharomyces pombe
6.5e-16
87.8
752
20.2
gene13733
Fragilariopsis cylindrus
2.5e-15
85.9
537
22.9
AT3G53760
Arabidopsis thaliana
4.2e-15
85.1
505
20.6
fso119530
Fistulifera solaris
4.2e-15
85.1
589
23.9
CC00G57600
Cyclotella cryptica
7.2e-15
84.3
677
20.4
fso30500
Fistulifera solaris
3.9e-13
78.6
594
23.7
Sro50_g029000
Seminavis robusta
1.1e-12
77.0
697
21.1
ENSG00000137822
Homo sapiens
8.2e-11
70.9
584
19.3
Pp3c8_15910
Physcomitrella patens
1.5e-09
66.6
243
27.6
sya00G96230
Synedra acus
2.2e-08
62.8
85
40.0
FBgn0026432
Drosophila melanogaster
6.5e-08
61.2
250
24.0
AT1G80260
Arabidopsis thaliana
1.9e-07
59.7
308
22.7
Cre12.g525500
Chlamydomonas reinhardtii
1.6e-06
56.6
132
32.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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