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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso199510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso199510
Fistulifera solaris
3.1e-290
998.4
490
100.0
fso73640
Fistulifera solaris
7.6e-273
940.6
499
94.8
ptri69840
Phaeodactylum tricornutum
5.6e-167
589.0
510
59.4
CC00G149660
Cyclotella cryptica
1.4e-122
441.4
328
66.2
Sro70_g039030
Seminavis robusta
9.3e-122
438.7
441
52.4
fso64760
Fistulifera solaris
8.7e-120
432.2
461
51.4
fso43770
Fistulifera solaris
1.5e-119
431.4
462
51.7
ptri72160
Phaeodactylum tricornutum
6.3e-118
426.0
440
51.1
sya00G196410
Synedra acus
1.7e-115
417.9
306
60.8
Sro695_g188680
Seminavis robusta
1.1e-114
415.2
339
62.5
ps00G65070
Pseudo-nitzschia multiseries
3.2e-114
413.7
312
61.2
gene18213
Fragilariopsis cylindrus
7.2e-114
412.5
312
60.3
tps142420
Thalassiosira pseudonana
2.8e-110
400.6
278
68.3
tps193950
Thalassiosira pseudonana
2.6e-103
377.5
278
65.1
CC00G122160
Cyclotella cryptica
6.1e-97
356.3
251
68.5
ps00G33510
Pseudo-nitzschia multiseries
4.2e-82
307.0
298
45.0
sya00G161050
Synedra acus
9.4e-82
305.8
297
45.5
fso77050
Fistulifera solaris
1.2e-81
305.4
312
47.8
fso77080
Fistulifera solaris
2.7e-81
304.3
288
46.9
fso191720
Fistulifera solaris
3.6e-81
303.9
312
47.4
Sro99_g050950
Seminavis robusta
9.8e-79
295.8
289
45.0
Sro968_g226070
Seminavis robusta
1.7e-78
295.0
301
43.9
ptri130290
Phaeodactylum tricornutum
3.7e-78
293.9
284
44.7
fso160310
Fistulifera solaris
4.8e-78
293.5
307
45.0
gene16313
Fragilariopsis cylindrus
1.8e-77
291.6
284
44.0
tps130000
Thalassiosira pseudonana
2.4e-77
291.2
279
46.6
sya00G00440
Synedra acus
3.0e-72
274.2
192
63.0
tho217020
Thalassiosira oceanica
1.3e-70
268.9
421
36.1
tho328140
Thalassiosira oceanica
1.2e-52
209.1
455
34.7
Sro9_g007140
Seminavis robusta
1.9e-42
175.3
156
51.9
CC00G69060
Cyclotella cryptica
1.7e-38
162.2
186
39.8
FBgn0031816
Drosophila melanogaster
1.7e-38
162.2
278
32.7
ENSG00000163743
Homo sapiens
1.1e-37
159.5
265
31.7
CM13G01410
Cyanidioschyzon merolae
5.6e-34
147.1
287
33.8
Cre05.g248550
Chlamydomonas reinhardtii
2.8e-33
144.8
281
33.5
CC00G86210
Cyclotella cryptica
3.1e-32
141.4
477
26.6
SPAC2F3.16
Schizosaccharomyces pombe
4.0e-32
141.0
307
31.6
tps146910
Thalassiosira pseudonana
5.3e-32
140.6
218
34.4
Cre17.g718300
Chlamydomonas reinhardtii
1.2e-31
139.4
280
34.6
AT3G62970
Arabidopsis thaliana
1.5e-31
139.0
279
34.1
ps00G05920
Pseudo-nitzschia multiseries
3.4e-31
137.9
282
33.0
AT1G18910
Arabidopsis thaliana
2.2e-30
135.2
280
31.8
AT1G74770
Arabidopsis thaliana
1.1e-29
132.9
278
29.1
fso155640
Fistulifera solaris
7.1e-29
130.2
435
24.6
sya00G162130
Synedra acus
9.3e-29
129.8
427
27.2
Pp3c10_4820
Physcomitrella patens
1.6e-28
129.0
281
31.7
Pp3c14_5600
Physcomitrella patens
7.8e-28
126.7
279
32.6
Ec-26_004520
Ectocarpus siliculosus
1.7e-27
125.6
301
30.6
AT3G18290
Arabidopsis thaliana
5.1e-27
124.0
438
25.6
AT5G22920
Arabidopsis thaliana
6.6e-27
123.6
292
31.8
ccr161060
Chondrus crispus
1.1e-26
122.9
415
26.7
Naga_100090g9
Nannochloropsis gaditana
1.5e-26
122.5
453
24.1
Pp3c6_1960
Physcomitrella patens
1.5e-26
122.5
279
31.5
ccr65580
Chondrus crispus
3.3e-26
121.3
285
28.1
Pp3c11_6970
Physcomitrella patens
4.3e-26
120.9
278
31.7
Pp3c1_6070
Physcomitrella patens
9.6e-26
119.8
278
32.0
Pp3c2_31820
Physcomitrella patens
2.1e-25
118.6
278
32.4
ccr36960
Chondrus crispus
3.6e-25
117.9
476
27.9
Pp3c25_14501
Physcomitrella patens
2.4e-24
115.2
439
27.3
Pp3c25_14500
Physcomitrella patens
2.4e-24
115.2
439
27.3
gsu76240
Galdieria sulphuraria
5.8e-23
110.5
426
27.5
AT5G25560
Arabidopsis thaliana
2.2e-22
108.6
296
32.4
pte443830
Paramecium tetraurelia
2.4e-21
105.1
281
30.6
pte760660
Paramecium tetraurelia
5.4e-21
104.0
286
30.4
gene11141
Fragilariopsis cylindrus
7.1e-21
103.6
182
36.3
fso150310
Fistulifera solaris
3.9e-19
97.8
222
26.6
Sro9_g007130
Seminavis robusta
1.4e-16
89.4
45
75.6
CC00G85450
Cyclotella cryptica
1.6e-12
75.9
35
80.0
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
5.6e-10
67.4
132
29.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing