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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso19760
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso19760
Fistulifera solaris
5.4e-293
1007.7
524
100.0
fso178030
Fistulifera solaris
2.4e-261
902.5
521
91.6
ptri242730
Phaeodactylum tricornutum
1.5e-157
557.8
521
60.7
Sro1940_g306640
Seminavis robusta
3.0e-150
533.5
535
58.5
gene13671
Fragilariopsis cylindrus
1.6e-148
527.7
532
56.8
PSNMU-V1.4_AUG-EV-PASAV3_0016360
Pseudo-nitzschia multistriata
3.6e-140
500.0
535
55.7
tho30880
Thalassiosira oceanica
5.5e-128
459.5
537
52.1
CC00G159820
Cyclotella cryptica
5.1e-126
453.0
555
50.6
tps75010
Thalassiosira pseudonana
4.5e-122
439.9
495
52.5
tps215070
Thalassiosira pseudonana
4.5e-122
439.9
495
52.5
ps00G19110
Pseudo-nitzschia multiseries
3.1e-115
417.2
488
49.4
sya00G169610
Synedra acus
3.3e-101
370.5
392
55.6
sya00G52050
Synedra acus
9.7e-101
369.0
353
58.6
emh307840
Emiliania huxleyi
1.8e-94
348.2
542
43.4
Ec-11_001930
Ectocarpus siliculosus
1.1e-93
345.5
623
38.2
emh427970
Emiliania huxleyi
2.0e-93
344.7
537
43.6
Naga_100011g22
Nannochloropsis gaditana
2.6e-93
344.4
476
44.3
ENSG00000130299
Homo sapiens
8.3e-84
312.8
528
40.9
AA0026G00780
Aureococcus anophagefferens
3.2e-80
300.8
514
42.2
FBgn0039189
Drosophila melanogaster
1.0e-73
279.3
518
37.8
ccr153240
Chondrus crispus
3.3e-72
274.2
422
42.2
YMR023C
Saccharomyces cerevisiae strain S288C
7.5e-69
263.1
536
35.3
AA1320G00010
Aureococcus anophagefferens
2.4e-67
258.1
312
49.7
gsu134320
Galdieria sulphuraria
3.2e-67
257.7
526
34.4
ps00G41090
Pseudo-nitzschia multiseries
1.5e-61
238.8
511
36.0
SPAC222.05c
Schizosaccharomyces pombe
6.4e-60
233.4
524
33.8
sya00G34240
Synedra acus
5.0e-57
223.8
496
34.5
gsu134340
Galdieria sulphuraria
3.6e-55
217.6
476
33.2
Cre16.g681238
Chlamydomonas reinhardtii
1.1e-54
216.1
527
33.2
CM11G02220
Cyanidioschyzon merolae
4.9e-52
207.2
521
32.8
Pp3c13_12516
Physcomitrella patens
1.3e-49
199.1
554
32.3
Pp3c13_12510
Physcomitrella patens
1.3e-49
199.1
554
32.3
WBGene00009557
Caenorhabditis elegans
1.1e-46
189.5
512
30.5
AT1G78010
Arabidopsis thaliana
5.4e-43
177.2
510
31.0
CMCG00250
Cyanidioschyzon merolae
2.1e-34
148.7
325
34.2
sya00G19470
Synedra acus
1.2e-29
132.9
115
64.3
Ec-09_002220
Ectocarpus siliculosus
1.2e-13
79.7
183
34.4
ccr88980
Chondrus crispus
3.4e-13
78.2
127
38.6
gsu132180
Galdieria sulphuraria
4.2e-11
71.2
109
42.2
emh360860
Emiliania huxleyi
2.7e-10
68.6
214
28.0
Naga_100004g20
Nannochloropsis gaditana
2.7e-10
68.6
112
35.7
CM03G00590
Cyanidioschyzon merolae
5.1e-09
64.3
160
34.4
Ec-06_010850
Ectocarpus siliculosus
5.1e-09
64.3
112
34.8
tps88370
Thalassiosira pseudonana
6.7e-09
63.9
123
36.6
AA0009G00180
Aureococcus anophagefferens
3.3e-08
61.6
68
42.6
gene10120
Fragilariopsis cylindrus
3.3e-08
61.6
126
37.3
gene9514
Fragilariopsis cylindrus
3.3e-08
61.6
126
37.3
AA0007G04060
Aureococcus anophagefferens
7.4e-08
60.5
96
40.6
fso131970
Fistulifera solaris
7.4e-08
60.5
125
34.4
ps00G56160
Pseudo-nitzschia multiseries
7.4e-08
60.5
137
35.0
CC00G174140
Cyclotella cryptica
1.3e-07
59.7
129
34.1
sya00G17330
Synedra acus
1.3e-07
59.7
189
29.1
gene13399
Fragilariopsis cylindrus
1.6e-07
59.3
204
27.0
fso198290
Fistulifera solaris
1.6e-07
59.3
61
50.8
PSNMU-V1.4_AUG-EV-PASAV3_0021010
Pseudo-nitzschia multistriata
1.6e-07
59.3
241
27.0
Sro699_g189460
Seminavis robusta
2.8e-07
58.5
143
32.2
Cre16.g658526
Chlamydomonas reinhardtii
4.8e-07
57.8
125
32.0
fso24190
Fistulifera solaris
4.8e-07
57.8
61
47.5
PSNMU-V1.4_AUG-EV-PASAV3_0031930
Pseudo-nitzschia multistriata
4.8e-07
57.8
137
32.8
ptri69130
Phaeodactylum tricornutum
6.3e-07
57.4
113
33.6
Sro9_g007110
Seminavis robusta
6.3e-07
57.4
127
35.4
tps62700
Thalassiosira pseudonana
1.1e-06
56.6
101
35.6
ps00G01310
Pseudo-nitzschia multiseries
1.4e-06
56.2
174
31.0
ptri212510
Phaeodactylum tricornutum
1.8e-06
55.8
128
35.2
ps00G167090
Pseudo-nitzschia multiseries
2.4e-06
55.5
211
23.7
Cre06.g296750
Chlamydomonas reinhardtii
3.1e-06
55.1
98
35.7
pte133680
Paramecium tetraurelia
3.1e-06
55.1
150
30.7
Sro1555_g282140
Seminavis robusta
3.1e-06
55.1
93
41.9
PSNMU-V1.4_AUG-EV-PASAV3_0124160
Pseudo-nitzschia multistriata
6.9e-06
53.9
96
32.3
Pp3c11_19380
Physcomitrella patens
6.9e-06
53.9
126
34.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (4 genes)
Synedra acus (5 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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