Gene: fso19760 (Fistulifera solaris)

Overview top

Gene Identifier
fso19760
Transcript Identifier
fso19760.1
Gene Type
Coding gene
Location
BDSP01000036 : 250670-252880 : positive

Family Information

Homologous gene family
HOM02SEM001728
(35 genes in 25 species)
specific family
Orthologous gene family
ORTHO02SEM001784
(35 genes in 25 species)
specific family
Duplication type
Block duplicate

Descriptions

eggnog_description
Trna modification gtpase

Identifiers

Type Value
old_gifso:g1976

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IEA
InterProtRNA modification
GO:0070899
IEA
EggNOGmappermitochondrial tRNA wobble uridine modification
GO:1900864
IEA
PLAZA Integrative Orthologymitochondrial RNA modification YMR023C
GO:0000963
IEA
PLAZA Integrative Orthologymitochondrial RNA processing YMR023C
GO:0002098
IEA
PLAZA Integrative OrthologytRNA wobble uridine modification YMR023C
GO:0002097
IEA
PLAZA Integrative OrthologytRNA wobble base modification YMR023C
GO:0090646
IEA
PLAZA Integrative Orthologymitochondrial tRNA processing YMR023C
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YMR023C
GO:0070525
IEA
PLAZA Integrative OrthologytRNA threonylcarbamoyladenosine metabolic process YMR023C
GO:0070900
IEA
PLAZA Integrative Orthologymitochondrial tRNA modification YMR023C
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YMR023C
GO:0006195
IEA
EggNOGmapperpurine nucleotide catabolic process
GO:0009207
IEA
EggNOGmapperpurine ribonucleoside triphosphate catabolic process
GO:0046085
IEA
EggNOGmapperadenosine metabolic process
GO:1901069
IEA
EggNOGmapperguanosine-containing compound catabolic process
GO:0007005
IEA
EggNOGmappermitochondrion organization
GO:0009154
IEA
EggNOGmapperpurine ribonucleotide catabolic process
GO:0046039
IEA
EggNOGmapperGTP metabolic process
GO:0032543
IEA
EggNOGmappermitochondrial translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003924
IEA
EggNOGmapperGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
EggNOGmapperGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0032550
IEA
EggNOGmapperpurine ribonucleoside binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
IEA
InterProintracellular
GO:0016020
IEA
PLAZA Integrative Orthologymembrane YMR023C
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YMR023C
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC222.05c
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope YMR023C
GO:0031966
IEA
PLAZA Integrative Orthologymitochondrial membrane YMR023C
GO:0005743
IEA
EggNOGmappermitochondrial inner membrane
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane YMR023C
GO:0005740
IEA
EggNOGmappermitochondrial envelope
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC222.05c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YMR023C
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YMR023C
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YMR023C
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part YMR023C
GO:0019866
IEA
PLAZA Integrative Orthologyorganelle inner membrane YMR023C
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope YMR023C
GO:0005829
IEA
PLAZA Integrative Orthologycytosol YMR023C
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle YMR023C
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle YMR023C
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle YMR023C
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle YMR023C
GO:0005634
IEA
EggNOGmappernucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR031168TrmE-type guanine nucleotide-binding domain
IPR027368tRNA modification GTPase MnmE domain 2
IPR027266GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR004520tRNA modification GTPase MnmE
IPR025867MnmE, helical domain
IPR018948GTP-binding protein TrmE, N-terminal
IPR006073GTP binding domain
IPR005225Small GTP-binding protein domain

No MapMan annotations defined for this gene.
KeggID Description
K03650mnmE, trmE, MSS1; tRNA modification GTPase [EC:3.6.-.-]
K10769ALKBH7; alkylated DNA repair protein alkB homolog 7 [EC:1.14.11.-]
No chloroplast target sequence found.