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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso07890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso07890
Fistulifera solaris
0.0e+00
1199.5
601
100.0
fso53230
Fistulifera solaris
0.0e+00
1078.2
594
91.4
Sro968_g226040
Seminavis robusta
1.3e-128
461.8
615
46.7
ptri130350
Phaeodactylum tricornutum
1.6e-123
444.9
594
46.5
CC00G76420
Cyclotella cryptica
3.1e-119
430.6
603
43.6
PSNMU-V1.4_AUG-EV-PASAV3_0059780
Pseudo-nitzschia multistriata
5.9e-110
399.8
674
40.1
gene4985
Fragilariopsis cylindrus
1.6e-99
365.2
646
38.7
ps00G128710
Pseudo-nitzschia multiseries
2.7e-99
364.4
644
37.7
Naga_100028g42
Nannochloropsis gaditana
2.8e-88
327.8
546
39.2
Cre09.g408464
Chlamydomonas reinhardtii
3.8e-85
317.4
568
38.2
CM14G03090
Cyanidioschyzon merolae
3.0e-77
291.2
614
33.7
sya00G214230
Synedra acus
1.9e-71
271.9
447
41.2
emh539730
Emiliania huxleyi
1.4e-63
245.7
599
34.9
AA0003G04380
Aureococcus anophagefferens
2.4e-63
245.0
578
33.4
SPBC6B1.08c
Schizosaccharomyces pombe
1.0e-61
239.6
558
31.7
Ec-12_001090
Ectocarpus siliculosus
3.4e-57
224.6
668
29.3
YER049W
Saccharomyces cerevisiae strain S288C
1.5e-49
199.1
637
28.4
gene5981
Fragilariopsis cylindrus
2.9e-32
141.7
314
33.4
gene5982
Fragilariopsis cylindrus
6.0e-30
134.0
205
41.0
FBgn0265189
Drosophila melanogaster
4.6e-22
107.8
512
25.2
WBGene00015915
Caenorhabditis elegans
3.7e-19
98.2
249
32.1
Ec-12_001100
Ectocarpus siliculosus
5.3e-18
94.4
386
26.9
ENSG00000087263
Homo sapiens
2.6e-17
92.0
608
23.2
emh43490
Emiliania huxleyi
1.6e-14
82.8
153
39.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing