Gene: SPBC6B1.08c (Schizosaccharomyces pombe)

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Gene Identifier
SPBC6B1.08c
Transcript Identifier
SPBC6B1.08c.1
Gene Type
Coding gene
Location
II : 2645046-2646593 : negative

Family Information

Homologous gene family
HOM02SEM003406
(23 genes in 18 species)
specific family
Orthologous gene family
ORTHO02SEM003585
(23 genes in 18 species)
specific family

Descriptions

gene_descr
2-oxoglutarate and Fe(II) dioxygenase domain containing protein 1

Identifiers

Type Value
pidSPBC6B1.08c.1:pep
UniprotQ11120
RefSeq_mRNANM_001022001
EMBLCU329671
EMBLD83659

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000678
IMP
Genome Projectnegative regulation of transcription regulatory region DNA binding
GO:0010620
IMP
Genome Projectnegative regulation of transcription by transcription factor catabolism
GO:0010620
IMP
Gene Ontologynegative regulation of transcription by transcription factor catabolism1
GO:2000679
IMP
Genome Projectpositive regulation of transcription regulatory region DNA binding
GO:0032436
IGI
Genome Projectpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032436
IMP, IGI
Gene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1 2
GO:0071455
IMP
Genome Projectcellular response to hyperoxia
GO:0071455
IMP
Gene Ontologycellular response to hyperoxia2
GO:0071456
IEP
Genome Projectcellular response to hypoxia
GO:0018188
IDA
Genome Projectpeptidyl-proline di-hydroxylation
GO:2000639
IMP
Gene Ontologynegative regulation of SREBP signaling pathway2
GO:0043392
IMP
Gene Ontologynegative regulation of DNA binding2
GO:1900038
IMP
Gene Ontologynegative regulation of cellular response to hypoxia3
GO:0055114
IEA
PLAZA Integrative Orthologyoxidation-reduction process YER049W
GO:0010608
IEA
PLAZA Integrative Orthologyposttranscriptional regulation of gene expression ENSG00000087263
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process YER049W
GO:0006307
IEA
PLAZA Integrative OrthologyDNA dealkylation involved in DNA repair YER049W
GO:0000288
IEA
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, deadenylation-dependent decay YER049W
GO:0022411
IEA
PLAZA Integrative Orthologycellular component disassembly YER049W
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000087263
GO:0022613
IEA
PLAZA Integrative Orthologyribonucleoprotein complex biogenesis ENSG00000087263
GO:0022618
IEA
PLAZA Integrative Orthologyribonucleoprotein complex assembly ENSG00000087263
GO:0071826
IEA
PLAZA Integrative Orthologyribonucleoprotein complex subunit organization ENSG00000087263
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization YER049W
GO:0032984
IEA
PLAZA Integrative Orthologyprotein-containing complex disassembly YER049W
GO:0070989
IEA
PLAZA Integrative Orthologyoxidative demethylation YER049W
GO:0070988
IEA
PLAZA Integrative Orthologydemethylation YER049W
GO:0034248
IEA
PLAZA Integrative Orthologyregulation of cellular amide metabolic process ENSG00000087263
GO:0016071
IEA
PLAZA Integrative OrthologymRNA metabolic process YER049W
GO:0006415
IEA
PLAZA Integrative Orthologytranslational termination YER049W
GO:0006417
IEA
PLAZA Integrative Orthologyregulation of translation ENSG00000087263
GO:0006304
IEA
PLAZA Integrative OrthologyDNA modification YER049W
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process YER049W
GO:0043244
IEA
PLAZA Integrative Orthologyregulation of protein complex disassembly ENSG00000087263
GO:0000956
IEA
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process YER049W
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process YER049W
GO:0043603
IEA
PLAZA Integrative Orthologycellular amide metabolic process YER049W
GO:0008283
IEA
PLAZA Integrative Orthologycell proliferation ENSG00000087263
GO:0043604
IEA
PLAZA Integrative Orthologyamide biosynthetic process YER049W
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YER049W
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YER049W
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process YER049W
GO:0043043
IEA
PLAZA Integrative Orthologypeptide biosynthetic process YER049W
GO:0006449
IEA
PLAZA Integrative Orthologyregulation of translational termination ENSG00000087263
GO:0006412
IEA
PLAZA Integrative Orthologytranslation YER049W
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process YER049W
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus YER049W
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process YER049W
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000087263
GO:0034063
IEA
PLAZA Integrative Orthologystress granule assembly ENSG00000087263
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization ENSG00000087263
GO:0035510
IEA
PLAZA Integrative OrthologyDNA dealkylation YER049W
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly ENSG00000087263
GO:0006518
IEA
PLAZA Integrative Orthologypeptide metabolic process YER049W
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000087263
GO:0006401
IEA
PLAZA Integrative OrthologyRNA catabolic process YER049W
GO:0043624
IEA
PLAZA Integrative Orthologycellular protein complex disassembly YER049W
GO:0006402
IEA
PLAZA Integrative OrthologymRNA catabolic process YER049W
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000087263
GO:0070925
IEA
PLAZA Integrative Orthologyorganelle assembly ENSG00000087263
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process YER049W
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair YER049W

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005506
IEA
Genome Projectiron ion binding
GO:0031543
IDA
Genome Projectpeptidyl-proline dioxygenase activity
GO:0031543
IDA
Gene Ontologypeptidyl-proline dioxygenase activity3 4
GO:0005515
IPI
Genome Projectprotein binding
GO:0005515
IPI
Gene Ontologyprotein binding2 3 5
GO:0048037
IEA
PLAZA Homology (enrichment)cofactor binding HOM02SEM003406
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding YER049W
GO:0050662
IEA
PLAZA Homology (enrichment)coenzyme binding HOM02SEM003406
GO:0031406
IEA
PLAZA Homology (enrichment)carboxylic acid binding HOM02SEM003406
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding YER049W
GO:0048029
IEA
PLAZA Homology (enrichment)monosaccharide binding HOM02SEM003406
GO:0043177
IEA
PLAZA Homology (enrichment)organic acid binding HOM02SEM003406
GO:0140097
IEA
PLAZA Integrative Orthologycatalytic activity, acting on DNA YER049W
GO:0030246
IEA
PLAZA Homology (enrichment)carbohydrate binding HOM02SEM003406
GO:0031418
IEA
PLAZA Homology (enrichment)L-ascorbic acid binding HOM02SEM003406
GO:0043168
IEA
PLAZA Homology (enrichment)anion binding HOM02SEM003406
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding YER049W
GO:0031544
IEA
PLAZA Integrative Orthologypeptidyl-proline 3-dioxygenase activity ENSG00000087263
GO:0008198
IEA
PLAZA Integrative Orthologyferrous iron binding YER049W
GO:0070717
IEA
PLAZA Integrative Orthologypoly-purine tract binding YER049W
GO:0019842
IEA
PLAZA Homology (enrichment)vitamin binding HOM02SEM003406
GO:0035516
IEA
PLAZA Integrative Orthologyoxidative DNA demethylase activity YER049W
GO:0035514
IEA
PLAZA Integrative OrthologyDNA demethylase activity YER049W
GO:0003727
IEA
PLAZA Integrative Orthologysingle-stranded RNA binding YER049W
GO:0003723
IEA
PLAZA Integrative OrthologyRNA binding YER049W
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM003406
GO:0008143
IEA
PLAZA Integrative Orthologypoly(A) binding YER049W
GO:0032451
IEA
PLAZA Integrative Orthologydemethylase activity YER049W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISO
Genome Projectnucleus
GO:0005634
IDA
Gene Ontologynucleus3 6
GO:0005829
IDA
Genome Projectcytosol
GO:0005829
Gene Ontologycytosol6
GO:1990904
ISO
Gene Ontologyribonucleoprotein complex
GO:0010494
IEA
PLAZA Integrative Orthologycytoplasmic stress granule ENSG00000087263
GO:0036464
IEA
PLAZA Integrative Orthologycytoplasmic ribonucleoprotein granule ENSG00000087263
GO:0035770
IEA
PLAZA Integrative Orthologyribonucleoprotein granule ENSG00000087263
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle ENSG00000087263
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle ENSG00000087263

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR006620Prolyl 4-hydroxylase, alpha subunit
IPR019601Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.