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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro702_g190020
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro702_g190020
Seminavis robusta
0.0e+00
2835.4
1421
100.0
ptri229490
Phaeodactylum tricornutum
2.5e-228
794.3
1444
38.5
gene16538
Fragilariopsis cylindrus
6.1e-182
640.2
1459
34.3
PSNMU-V1.4_AUG-EV-PASAV3_0049860
Pseudo-nitzschia multistriata
3.4e-180
634.4
1429
34.4
fso115510
Fistulifera solaris
2.2e-163
578.6
1363
33.7
fso24760
Fistulifera solaris
6.0e-161
570.5
1358
32.7
sya00G144750
Synedra acus
2.1e-142
508.8
1469
29.8
CC00G176260
Cyclotella cryptica
5.5e-82
308.1
1475
26.4
ps00G156210
Pseudo-nitzschia multiseries
9.1e-69
264.2
1358
25.5
tps31820
Thalassiosira pseudonana
4.9e-46
188.7
1302
25.3
tho47900
Thalassiosira oceanica
2.1e-36
156.8
1399
22.4
Naga_100112g2
Nannochloropsis gaditana
4.1e-29
132.5
187
39.6
ENSG00000103091
Homo sapiens
1.8e-16
90.5
138
34.1
FBgn0032339
Drosophila melanogaster
3.4e-15
86.3
126
35.7
tps50900
Thalassiosira pseudonana
2.2e-14
83.6
264
25.8
CC00G45610
Cyclotella cryptica
4.6e-12
75.9
262
24.8
ENSG00000127580
Homo sapiens
6.0e-12
75.5
179
27.9
PSNMU-V1.4_AUG-EV-PASAV3_0088380
Pseudo-nitzschia multistriata
7.9e-12
75.1
326
27.0
fso123160
Fistulifera solaris
5.1e-11
72.4
299
24.4
gene14933
Fragilariopsis cylindrus
8.7e-11
71.6
307
26.1
ps00G116770
Pseudo-nitzschia multiseries
8.7e-11
71.6
282
25.2
fso80160
Fistulifera solaris
3.3e-10
69.7
302
24.2
pte698410
Paramecium tetraurelia
4.3e-10
69.3
68
47.1
pte292060
Paramecium tetraurelia
5.6e-10
68.9
187
28.9
ptri113380
Phaeodactylum tricornutum
1.3e-09
67.8
297
23.2
emh86990
Emiliania huxleyi
4.0e-08
62.8
51
47.1
FBgn0027518
Drosophila melanogaster
5.3e-08
62.4
81
35.8
pte732030
Paramecium tetraurelia
6.9e-08
62.0
66
40.9
YDR128W
Saccharomyces cerevisiae strain S288C
4.9e-06
55.8
130
29.2
emh40330
Emiliania huxleyi
8.4e-06
55.1
98
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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