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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro556_g165920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro556_g165920
Seminavis robusta
0.0e+00
1294.3
686
100.0
fso43860
Fistulifera solaris
1.7e-113
411.8
557
45.1
fso64850
Fistulifera solaris
9.4e-112
406.0
545
45.7
sya00G252680
Synedra acus
3.2e-104
380.9
568
42.4
ptri207540
Phaeodactylum tricornutum
3.5e-98
360.9
553
43.4
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
1.8e-78
295.4
605
35.2
ps00G173860
Pseudo-nitzschia multiseries
7.0e-75
283.5
537
36.7
ENSG00000101751
Homo sapiens
1.6e-26
122.9
267
33.0
ccr169420
Chondrus crispus
3.3e-24
115.2
360
28.1
Cre03.g148050
Chlamydomonas reinhardtii
2.1e-23
112.5
436
25.7
emh530300
Emiliania huxleyi
2.9e-20
102.1
346
26.9
emh67860
Emiliania huxleyi
2.9e-20
102.1
346
26.9
gsu33630
Galdieria sulphuraria
1.4e-19
99.8
266
27.8
Ec-01_006080
Ectocarpus siliculosus
3.2e-19
98.6
283
29.0
CM01G00620
Cyanidioschyzon merolae
7.1e-19
97.4
277
30.0
Pp3c14_23660
Physcomitrella patens
3.5e-18
95.1
290
27.2
FBgn0037554
Drosophila melanogaster
3.9e-17
91.7
311
26.0
gsu71910
Galdieria sulphuraria
3.3e-16
88.6
307
27.4
FBgn0037141
Drosophila melanogaster
9.6e-16
87.0
284
28.5
ENSG00000122008
Homo sapiens
6.3e-15
84.3
278
27.0
AT5G44740
Arabidopsis thaliana
1.1e-14
83.6
346
25.1
ENSG00000170734
Homo sapiens
1.1e-14
83.6
279
28.3
AA0002G04000
Aureococcus anophagefferens
1.4e-14
83.2
116
35.3
emh117440
Emiliania huxleyi
6.9e-14
80.9
86
45.3
Pp3c8_17250
Physcomitrella patens
6.9e-14
80.9
282
26.6
pte531460
Paramecium tetraurelia
1.2e-13
80.1
294
25.9
pte538790
Paramecium tetraurelia
1.5e-13
79.7
295
25.1
gsu07230
Galdieria sulphuraria
5.9e-13
77.8
294
25.5
pte497140
Paramecium tetraurelia
1.3e-12
76.6
271
24.7
Ec-17_000370
Ectocarpus siliculosus
1.9e-11
72.8
206
30.1
AT1G49980
Arabidopsis thaliana
3.2e-11
72.0
278
25.5
ccr06940
Chondrus crispus
7.2e-11
70.9
290
25.2
SPBC16A3.11
Schizosaccharomyces pombe
7.2e-11
70.9
283
24.7
emh540590
Emiliania huxleyi
9.3e-11
70.5
284
25.7
pte645160
Paramecium tetraurelia
9.3e-11
70.5
267
22.8
Sro492_g153880
Seminavis robusta
2.1e-10
69.3
343
23.3
ptri209620
Phaeodactylum tricornutum
2.7e-10
68.9
421
25.7
CM13G02840
Cyanidioschyzon merolae
4.6e-10
68.2
262
22.5
Ec-14_004450
Ectocarpus siliculosus
4.6e-10
68.2
312
23.7
Cre02.g079850
Chlamydomonas reinhardtii
7.9e-10
67.4
270
24.8
WBGene00017696
Caenorhabditis elegans
6.7e-09
64.3
314
23.9
Cre07.g338602
Chlamydomonas reinhardtii
6.7e-09
64.3
66
42.4
SPCC553.07c
Schizosaccharomyces pombe
9.7e-08
60.5
69
40.6
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
1.3e-07
60.1
438
20.8
PSNMU-V1.4_AUG-EV-PASAV3_0104030
Pseudo-nitzschia multistriata
2.2e-07
59.3
290
24.8
tho441720
Thalassiosira oceanica
4.8e-07
58.2
319
24.5
ptri167230
Phaeodactylum tricornutum
1.4e-06
56.6
336
22.0
fso58700
Fistulifera solaris
1.8e-06
56.2
335
24.8
Sro1969_g308490
Seminavis robusta
2.4e-06
55.8
275
24.4
Naga_100321g4
Nannochloropsis gaditana
3.1e-06
55.5
274
24.5
fso144890
Fistulifera solaris
4.1e-06
55.1
323
24.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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