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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro1296_g260340
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro1296_g260340
Seminavis robusta
0.0e+00
1351.3
1176
100.0
ptri174050
Phaeodactylum tricornutum
3.1e-131
471.5
471
55.4
fso62760
Fistulifera solaris
4.8e-124
447.6
390
59.7
fso98070
Fistulifera solaris
7.0e-123
443.7
402
60.0
PSNMU-V1.4_AUG-EV-PASAV3_0076400
Pseudo-nitzschia multistriata
1.7e-121
439.1
361
63.2
sya00G107600
Synedra acus
3.2e-120
434.9
436
54.1
tho181820
Thalassiosira oceanica
9.1e-107
390.2
430
50.5
CC00G123270
Cyclotella cryptica
3.2e-104
381.7
376
52.9
ps00G104910
Pseudo-nitzschia multiseries
1.3e-84
316.6
290
57.9
tps215610
Thalassiosira pseudonana
1.0e-65
253.8
266
49.6
Naga_100058g10
Nannochloropsis gaditana
2.0e-61
239.6
360
39.7
Pp3c18_1400
Physcomitrella patens
7.1e-35
151.4
358
31.8
Pp3c21_20640
Physcomitrella patens
6.7e-33
144.8
335
30.4
emh230600
Emiliania huxleyi
1.9e-32
143.3
300
34.3
gene6356
Fragilariopsis cylindrus
4.5e-29
132.1
89
65.2
FBgn0036273
Drosophila melanogaster
5.0e-28
128.6
377
27.9
FBgn0023508
Drosophila melanogaster
1.0e-25
120.9
266
31.6
AT1G47510
Arabidopsis thaliana
1.3e-25
120.6
360
27.5
SPBC577.13
Schizosaccharomyces pombe
5.1e-25
118.6
356
28.4
Pp3c17_16770
Physcomitrella patens
1.1e-24
117.5
358
25.1
AT2G43900
Arabidopsis thaliana
1.5e-24
117.1
385
27.8
WBGene00006763
Caenorhabditis elegans
3.3e-24
115.9
279
31.5
SPBC2G2.02
Schizosaccharomyces pombe
7.4e-24
114.8
316
30.4
Pp3c16_2270
Physcomitrella patens
1.3e-23
114.0
303
29.7
YOR109W
Saccharomyces cerevisiae strain S288C
2.8e-23
112.8
353
26.6
Pp3c1_31610
Physcomitrella patens
3.7e-23
112.5
370
25.1
emh741740
Emiliania huxleyi
4.8e-23
112.1
344
29.1
YIL002C
Saccharomyces cerevisiae strain S288C
6.3e-23
111.7
351
26.8
YNL106C
Saccharomyces cerevisiae strain S288C
8.2e-23
111.3
268
29.5
ENSG00000148384
Homo sapiens
1.1e-22
110.9
342
29.8
ptri207600
Phaeodactylum tricornutum
1.1e-22
110.9
287
31.4
ENSG00000204084
Homo sapiens
1.4e-22
110.5
266
30.1
Pp3c2_9260
Physcomitrella patens
5.3e-22
108.6
370
24.9
AT1G65580
Arabidopsis thaliana
9.1e-22
107.8
393
26.2
ENSG00000159082
Homo sapiens
1.2e-21
107.5
237
31.2
ENSG00000168918
Homo sapiens
1.5e-21
107.1
362
25.7
ENSG00000281614
Homo sapiens
1.5e-21
107.1
362
25.7
ENSG00000122126
Homo sapiens
2.0e-21
106.7
267
29.2
AA0013G01530
Aureococcus anophagefferens
2.6e-21
106.3
130
44.6
tps96360
Thalassiosira pseudonana
2.6e-21
106.3
369
27.6
AT2G31830
Arabidopsis thaliana
4.5e-21
105.5
283
29.7
ENSG00000185133
Homo sapiens
7.7e-21
104.8
356
27.8
FBgn0034691
Drosophila melanogaster
2.9e-20
102.8
275
30.2
tho09120
Thalassiosira oceanica
2.9e-20
102.8
421
25.7
AT1G05630
Arabidopsis thaliana
3.8e-20
102.4
412
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0035030
Pseudo-nitzschia multistriata
1.1e-19
100.9
274
28.5
pte466450
Paramecium tetraurelia
1.1e-19
100.9
348
25.9
ps00G134480
Pseudo-nitzschia multiseries
1.4e-19
100.5
372
25.8
SPAC9G1.10c
Schizosaccharomyces pombe
1.4e-19
100.5
366
27.0
Naga_100007g108
Nannochloropsis gaditana
1.9e-19
100.1
282
31.2
AA0001G01310
Aureococcus anophagefferens
2.5e-19
99.8
83
53.0
gene8165
Fragilariopsis cylindrus
4.2e-19
99.0
272
29.0
pte549610
Paramecium tetraurelia
4.2e-19
99.0
348
25.9
ccr40360
Chondrus crispus
5.5e-19
98.6
423
26.0
CC00G108390
Cyclotella cryptica
7.2e-19
98.2
399
26.3
fso110980
Fistulifera solaris
7.2e-19
98.2
286
27.6
fso01860
Fistulifera solaris
9.4e-19
97.8
286
27.6
ccr144180
Chondrus crispus
1.2e-18
97.4
256
29.3
pte586100
Paramecium tetraurelia
2.7e-18
96.3
349
25.5
Sro1631_g287220
Seminavis robusta
2.7e-18
96.3
291
27.8
CM04G00800
Cyanidioschyzon merolae
6.1e-18
95.1
296
29.4
sya00G15890
Synedra acus
1.0e-17
94.4
284
28.2
emh168010
Emiliania huxleyi
1.8e-17
93.6
348
27.3
ccr45360
Chondrus crispus
3.9e-17
92.4
311
25.4
ENSG00000165458
Homo sapiens
3.9e-17
92.4
284
25.0
ENSG00000078269
Homo sapiens
6.7e-17
91.7
294
28.6
AT1G71710
Arabidopsis thaliana
8.8e-17
91.3
281
26.3
CC00G52380
Cyclotella cryptica
1.1e-16
90.9
322
24.2
Ec-26_000170
Ectocarpus siliculosus
1.1e-16
90.9
268
34.0
AT2G01900
Arabidopsis thaliana
1.5e-16
90.5
261
29.1
gsu65700
Galdieria sulphuraria
1.5e-16
90.5
362
27.3
AT4G18010
Arabidopsis thaliana
4.4e-16
89.0
274
26.6
emh607630
Emiliania huxleyi
1.3e-15
87.4
302
26.8
FBgn0034179
Drosophila melanogaster
2.2e-15
86.7
349
23.8
Pp3c1_32995
Physcomitrella patens
2.2e-15
86.7
275
28.7
Pp3c1_32990
Physcomitrella patens
2.2e-15
86.7
275
28.7
Pp3c21_6740
Physcomitrella patens
2.8e-15
86.3
400
26.0
AT5G04980
Arabidopsis thaliana
4.8e-15
85.5
287
26.5
Cre13.g563550
Chlamydomonas reinhardtii
6.3e-15
85.1
275
28.4
emh105190
Emiliania huxleyi
1.1e-14
84.3
282
28.7
Cre12.g530050
Chlamydomonas reinhardtii
3.1e-14
82.8
429
23.1
Pp3c18_13030
Physcomitrella patens
3.1e-14
82.8
413
26.4
WBGene00007620
Caenorhabditis elegans
4.1e-14
82.4
222
33.3
emh746130
Emiliania huxleyi
4.1e-14
82.4
240
29.6
Pp3c22_8620
Physcomitrella patens
5.3e-14
82.0
271
29.2
AT2G32010
Arabidopsis thaliana
6.9e-14
81.6
260
26.9
AT1G05470
Arabidopsis thaliana
9.1e-14
81.3
260
26.9
Pp3c19_21170
Physcomitrella patens
9.1e-14
81.3
383
26.9
Pp3c27_3390
Physcomitrella patens
1.2e-13
80.9
260
27.3
AT3G63240
Arabidopsis thaliana
4.5e-13
79.0
273
26.0
WBGene00086546
Caenorhabditis elegans
1.7e-12
77.0
130
36.2
ENSG00000132376
Homo sapiens
2.9e-12
76.3
353
22.4
Cre11.g467546
Chlamydomonas reinhardtii
5.0e-12
75.5
139
36.0
AA0012G02080
Aureococcus anophagefferens
5.5e-11
72.0
149
38.3
AT2G37440
Arabidopsis thaliana
7.2e-11
71.6
153
33.3
pte701430
Paramecium tetraurelia
2.7e-10
69.7
354
22.6
emh210980
Emiliania huxleyi
7.9e-10
68.2
285
23.2
Ec-09_000920
Ectocarpus siliculosus
7.9e-10
68.2
157
32.5
pte393890
Paramecium tetraurelia
7.9e-10
68.2
353
19.8
pte557850
Paramecium tetraurelia
1.1e-08
64.3
360
21.9
pte735150
Paramecium tetraurelia
1.7e-07
60.5
355
21.7
WBGene00012016
Caenorhabditis elegans
3.7e-07
59.3
150
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing