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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Pseudo-nitzschia multistriata
6.7e-193
674.5
323
100.0
ps00G134570
Pseudo-nitzschia multiseries
1.7e-180
633.3
319
93.1
ptri164470
Phaeodactylum tricornutum
8.3e-127
454.9
333
65.2
Sro909_g218970
Seminavis robusta
8.1e-114
411.8
392
53.6
fso62050
Fistulifera solaris
1.2e-109
397.9
319
59.9
fso166270
Fistulifera solaris
1.0e-108
394.8
321
58.9
sya00G114070
Synedra acus
3.9e-92
339.7
357
49.0
tps215990
Thalassiosira pseudonana
3.8e-79
296.6
324
49.1
CC00G155200
Cyclotella cryptica
1.1e-65
251.9
324
45.1
ENSG00000085415
Homo sapiens
1.7e-63
244.6
328
39.3
FBgn0033247
Drosophila melanogaster
1.3e-50
201.8
315
36.2
SPAC15F9.02
Schizosaccharomyces pombe
4.2e-46
186.8
327
31.8
YGL100W
Saccharomyces cerevisiae strain S288C
3.7e-42
173.7
344
29.4
Ec-07_003170
Ectocarpus siliculosus
2.6e-40
167.5
326
31.0
gsu58970
Galdieria sulphuraria
5.5e-38
159.8
291
32.6
WBGene00003804
Caenorhabditis elegans
4.4e-35
150.2
323
28.5
emh352120
Emiliania huxleyi
3.8e-31
137.1
324
29.6
CC00G140360
Cyclotella cryptica
1.2e-29
132.1
315
29.8
Cre17.g715750
Chlamydomonas reinhardtii
4.7e-29
130.2
303
31.4
WBGene00003806
Caenorhabditis elegans
8.0e-29
129.4
303
28.4
FBgn0024509
Drosophila melanogaster
1.0e-28
129.0
322
28.3
Pp3c5_28960
Physcomitrella patens
1.8e-28
128.3
324
28.4
gsu79930
Galdieria sulphuraria
6.8e-28
126.3
322
26.7
fso129150
Fistulifera solaris
1.2e-27
125.6
318
28.0
Sro702_g189930
Seminavis robusta
2.0e-27
124.8
314
27.4
tps29610
Thalassiosira pseudonana
1.8e-25
118.2
312
30.8
AA0009G02590
Aureococcus anophagefferens
2.0e-24
114.8
318
28.6
Cre03.g192000
Chlamydomonas reinhardtii
3.8e-23
110.5
299
27.1
fso53520
Fistulifera solaris
3.8e-23
110.5
318
26.7
Naga_101101g1
Nannochloropsis gaditana
2.5e-22
107.8
137
40.9
CM10G01140
Cyanidioschyzon merolae
4.2e-22
107.1
353
28.0
AT1G64350
Arabidopsis thaliana
2.0e-19
98.2
304
22.4
ptri231850
Phaeodactylum tricornutum
2.0e-19
98.2
329
25.2
Pp3c19_9370
Physcomitrella patens
3.4e-19
97.4
313
24.0
Pp3c19_12500
Physcomitrella patens
4.4e-19
97.1
311
25.1
Pp3c22_17920
Physcomitrella patens
7.5e-19
96.3
310
24.8
sya00G144690
Synedra acus
4.9e-18
93.6
320
24.4
gene14464
Fragilariopsis cylindrus
1.4e-17
92.0
331
25.7
gene1572
Fragilariopsis cylindrus
1.4e-17
92.0
328
25.3
Pp3c22_20020
Physcomitrella patens
2.4e-17
91.3
313
23.0
ccr56640
Chondrus crispus
5.4e-17
90.1
294
25.9
tho150740
Thalassiosira oceanica
2.3e-15
84.7
328
25.0
ps00G174630
Pseudo-nitzschia multiseries
2.9e-15
84.3
325
23.1
Ec-12_007790
Ectocarpus siliculosus
1.2e-13
79.0
316
22.5
pte445730
Paramecium tetraurelia
4.7e-13
77.0
129
34.1
tho667320
Thalassiosira oceanica
1.4e-12
75.5
61
52.5
ENSG00000157020
Homo sapiens
1.8e-12
75.1
332
22.0
pte607040
Paramecium tetraurelia
3.0e-12
74.3
278
24.5
pte420310
Paramecium tetraurelia
4.0e-12
73.9
310
23.9
pte758460
Paramecium tetraurelia
6.8e-12
73.2
129
33.3
emh224540
Emiliania huxleyi
2.0e-11
71.6
82
35.4
PSNMU-V1.4_AUG-EV-PASAV3_0095210
Pseudo-nitzschia multistriata
4.1e-09
63.9
74
32.4
Naga_101320g1
Nannochloropsis gaditana
5.4e-09
63.5
115
28.7
AT3G01340
Arabidopsis thaliana
2.7e-08
61.2
304
20.4
SPBC215.15
Schizosaccharomyces pombe
7.8e-08
59.7
66
34.8
AT2G30050
Arabidopsis thaliana
1.0e-07
59.3
304
19.7
Sro369_g128140
Seminavis robusta
2.3e-07
58.2
318
23.0
Naga_102334g1
Nannochloropsis gaditana
2.5e-06
54.7
83
38.6
YLR208W
Saccharomyces cerevisiae strain S288C
4.3e-06
53.9
64
32.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing