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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0059780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0059780
Pseudo-nitzschia multistriata
0.0e+00
1295.0
680
100.0
ps00G128710
Pseudo-nitzschia multiseries
7.2e-205
715.3
644
61.2
gene4985
Fragilariopsis cylindrus
2.9e-161
570.5
666
50.8
Sro968_g226040
Seminavis robusta
6.4e-145
516.2
671
45.6
CC00G76420
Cyclotella cryptica
1.1e-120
435.6
699
41.1
ptri130350
Phaeodactylum tricornutum
1.6e-119
431.8
618
43.5
fso53230
Fistulifera solaris
5.5e-112
406.8
648
41.0
fso07890
Fistulifera solaris
6.0e-111
403.3
674
40.1
Naga_100028g42
Nannochloropsis gaditana
4.1e-83
310.8
607
36.4
Cre09.g408464
Chlamydomonas reinhardtii
2.0e-82
308.5
616
34.7
sya00G214230
Synedra acus
9.4e-80
299.7
482
40.9
CM14G03090
Cyanidioschyzon merolae
1.1e-72
276.2
621
33.5
AA0003G04380
Aureococcus anophagefferens
1.0e-62
243.0
614
31.3
gene5981
Fragilariopsis cylindrus
2.2e-60
235.3
327
49.2
Ec-12_001090
Ectocarpus siliculosus
8.5e-57
223.4
697
32.4
YER049W
Saccharomyces cerevisiae strain S288C
8.8e-54
213.4
666
29.1
emh539730
Emiliania huxleyi
7.0e-51
203.8
605
32.4
SPBC6B1.08c
Schizosaccharomyces pombe
1.0e-46
189.9
598
29.8
gene5982
Fragilariopsis cylindrus
2.7e-42
175.3
198
50.5
WBGene00015915
Caenorhabditis elegans
2.4e-19
99.0
353
24.6
FBgn0265189
Drosophila melanogaster
4.1e-19
98.2
581
24.3
Ec-12_001100
Ectocarpus siliculosus
4.1e-19
98.2
384
32.3
emh43490
Emiliania huxleyi
9.6e-16
87.0
129
44.2
ENSG00000087263
Homo sapiens
5.4e-11
71.2
407
25.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing