Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Naga_100445g1
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Naga_100445g1
Nannochloropsis gaditana
0.0e+00
2012.7
1063
100.0
ptri190020
Phaeodactylum tricornutum
3.1e-122
441.4
580
44.1
AA0012G01140
Aureococcus anophagefferens
4.7e-118
427.6
540
43.0
Ec-11_000550
Ectocarpus siliculosus
9.7e-116
419.9
563
41.7
sya00G151810
Synedra acus
1.3e-115
419.5
588
40.3
Pp3c11_24680
Physcomitrella patens
5.9e-113
410.6
557
40.2
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
1.1e-111
406.4
577
40.4
Sro345_g122490
Seminavis robusta
1.1e-111
406.4
589
38.9
AT5G39840
Arabidopsis thaliana
7.2e-111
403.7
555
38.7
ps00G135460
Pseudo-nitzschia multiseries
1.8e-109
399.1
589
39.7
tps94420
Thalassiosira pseudonana
6.8e-109
397.1
564
39.7
CC00G47930
Cyclotella cryptica
3.4e-108
394.8
593
38.1
tho295100
Thalassiosira oceanica
4.4e-108
394.4
351
55.8
gene1104
Fragilariopsis cylindrus
2.2e-104
382.1
603
38.1
gene8944
Fragilariopsis cylindrus
8.3e-99
363.6
323
56.3
gsu141650
Galdieria sulphuraria
2.4e-98
362.1
560
38.2
ENSG00000156502
Homo sapiens
3.1e-98
361.7
567
37.6
AT4G14790
Arabidopsis thaliana
1.5e-95
352.8
557
38.1
FBgn0037232
Drosophila melanogaster
3.4e-92
341.7
587
35.1
gsu110850
Galdieria sulphuraria
1.8e-90
335.9
563
35.9
WBGene00007444
Caenorhabditis elegans
2.6e-84
315.5
561
35.3
Naga_100019g77
Nannochloropsis gaditana
1.3e-80
303.1
294
51.7
SPAC637.11
Schizosaccharomyces pombe
9.8e-76
287.0
542
33.4
YPL029W
Saccharomyces cerevisiae strain S288C
9.2e-74
280.4
341
45.5
CM16G01410
Cyanidioschyzon merolae
1.9e-71
272.7
716
30.9
Cre06.g270900
Chlamydomonas reinhardtii
5.6e-47
191.4
570
27.2
AA0016G01420
Aureococcus anophagefferens
2.9e-27
125.9
293
33.1
sya00G127370
Synedra acus
9.7e-23
110.9
277
32.9
ps00G40990
Pseudo-nitzschia multiseries
4.6e-17
92.0
239
33.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing