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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-15_003090
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-15_003090
Ectocarpus siliculosus
4.3e-136
486.1
416
100.0
fso58970
Fistulifera solaris
6.0e-21
103.6
447
36.7
fso144630
Fistulifera solaris
6.7e-20
100.1
449
34.7
tps176860
Thalassiosira pseudonana
3.3e-19
97.8
413
38.0
AT1G16190
Arabidopsis thaliana
2.1e-18
95.1
425
32.5
Pp3c10_8490
Physcomitrella patens
1.1e-17
92.8
419
42.7
AA0012G02530
Aureococcus anophagefferens
5.3e-17
90.5
411
41.1
ptri205220
Phaeodactylum tricornutum
5.3e-17
90.5
455
37.1
AT1G79650
Arabidopsis thaliana
2.0e-16
88.6
445
32.8
AT5G38470
Arabidopsis thaliana
1.7e-15
85.5
265
33.6
AT3G02540
Arabidopsis thaliana
6.5e-15
83.6
265
34.7
WBGene00013924
Caenorhabditis elegans
1.4e-14
82.4
417
28.3
gsu118460
Galdieria sulphuraria
1.4e-14
82.4
291
25.1
FBgn0026777
Drosophila melanogaster
4.2e-14
80.9
266
22.9
ps00G20760
Pseudo-nitzschia multiseries
5.1e-12
73.9
146
33.6
tho183380
Thalassiosira oceanica
5.1e-12
73.9
273
39.6
Cre08.g366400
Chlamydomonas reinhardtii
1.3e-10
69.3
265
49.1
Sro219_g090420
Seminavis robusta
1.3e-10
69.3
150
33.3
sya00G246040
Synedra acus
1.3e-10
69.3
305
33.8
sya00G21000
Synedra acus
1.6e-10
68.9
305
33.8
Pp3c21_190
Physcomitrella patens
2.2e-10
68.6
430
45.6
PSNMU-V1.4_AUG-EV-PASAV3_0047090
Pseudo-nitzschia multistriata
2.8e-10
68.2
303
45.9
gene18200
Fragilariopsis cylindrus
1.1e-09
66.2
150
36.7
ENSG00000179262
Homo sapiens
4.5e-08
60.8
252
22.2
SPBC2D10.12
Schizosaccharomyces pombe
5.9e-08
60.5
266
27.8
CC00G197600
Cyclotella cryptica
7.7e-08
60.1
216
32.9
emh257230
Emiliania huxleyi
2.2e-07
58.5
149
37.6
emh41890
Emiliania huxleyi
2.2e-07
58.5
149
37.6
Pp3c18_16750
Physcomitrella patens
2.9e-07
58.2
85
44.7
Pp3c21_210
Physcomitrella patens
1.1e-06
56.2
74
45.9
YEL037C
Saccharomyces cerevisiae strain S288C
1.4e-06
55.8
265
43.4
CM11G00530
Cyanidioschyzon merolae
2.5e-06
55.1
263
20.2
Naga_100054g12
Nannochloropsis gaditana
3.2e-06
54.7
60
43.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing