Gene: Ec-15_003090 (Ectocarpus siliculosus)

Overview top

Gene Identifier
Ec-15_003090
Transcript Identifier
Ec-15_003090.1
Gene Type
Coding gene
Location
chr_15 : 3324127-3332646 : positive

Family Information

Homologous gene family
HOM02SEM001092
(46 genes in 25 species)
specific family

Descriptions

Identifiers

Type Value
GeneNameEc-15_003090

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process SPBC2D10.12
GO:0030433
IEA
PLAZA Integrative Orthologyubiquitin-dependent ERAD pathway YEL037C
GO:0071103
IEA
PLAZA Integrative OrthologyDNA conformation change ENSG00000119318
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process SPBC2D10.12
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process ENSG00000179262
GO:0031647
IEA
PLAZA Integrative Orthologyregulation of protein stability ENSG00000179262
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process YEL037C
GO:0031648
IEA
PLAZA Integrative Orthologyprotein destabilization ENSG00000179262
GO:0006357
IEA
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II YEL037C
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle ENSG00000179262
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000119318
GO:1901698
IEA
PLAZA Integrative Orthologyresponse to nitrogen compound YEL037C
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated YEL037C
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process YEL037C
GO:0030162
IEA
PLAZA Integrative Orthologyregulation of proteolysis ENSG00000119318
GO:0009100
IEA
PLAZA Integrative Orthologyglycoprotein metabolic process YEL037C
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated YEL037C
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process YEL037C
GO:0045070
IEA
PLAZA Integrative Orthologypositive regulation of viral genome replication ENSG00000179262
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process YEL037C
GO:0016032
IEA
PLAZA Integrative Orthologyviral process ENSG00000179262
GO:2000058
IEA
PLAZA Integrative Orthologyregulation of ubiquitin-dependent protein catabolic process ENSG00000119318
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process YEL037C
GO:0032508
IEA
PLAZA Integrative OrthologyDNA duplex unwinding ENSG00000119318
GO:0000122
IEA
PLAZA Integrative Orthologynegative regulation of transcription by RNA polymerase II YEL037C
GO:1903900
IEA
PLAZA Integrative Orthologyregulation of viral life cycle ENSG00000179262
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription YEL037C
GO:1903902
IEA
PLAZA Integrative Orthologypositive regulation of viral life cycle ENSG00000179262
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription YEL037C
GO:0045862
IEA
PLAZA Integrative Orthologypositive regulation of proteolysis ENSG00000179262
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process YEL037C
GO:0045069
IEA
PLAZA Integrative Orthologyregulation of viral genome replication ENSG00000179262
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process YEL037C
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process YEL037C
GO:0044419
IEA
PLAZA Integrative Orthologyinterspecies interaction between organisms ENSG00000179262
GO:2000060
IEA
PLAZA Integrative Orthologypositive regulation of ubiquitin-dependent protein catabolic process ENSG00000179262
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process YEL037C
GO:1903050
IEA
PLAZA Integrative Orthologyregulation of proteolysis involved in cellular protein catabolic process ENSG00000119318
GO:0070911
IEA
PLAZA Integrative Orthologyglobal genome nucleotide-excision repair ENSG00000119318
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000119318
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process YEL037C
GO:0010467
IEA
PLAZA Integrative Orthologygene expression YEL037C
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000119318
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression YEL037C
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression YEL037C
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process YEL037C
GO:0044403
IEA
PLAZA Integrative Orthologysymbiont process ENSG00000179262
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process YEL037C
GO:0045732
IEA
PLAZA Integrative Orthologypositive regulation of protein catabolic process ENSG00000179262
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical YEL037C
GO:1903052
IEA
PLAZA Integrative Orthologypositive regulation of proteolysis involved in cellular protein catabolic process ENSG00000179262
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process YEL037C
GO:0070646
IEA
PLAZA Integrative Orthologyprotein modification by small protein removal ENSG00000119318
GO:0070647
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation or removal ENSG00000119318
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle ENSG00000179262
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000119318
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT5G38470
GO:0006517
IEA
PLAZA Integrative Orthologyprotein deglycosylation YEL037C
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process SPBC2D10.12
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process ENSG00000179262
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II YEL037C
GO:0042177
IEA
PLAZA Integrative Orthologynegative regulation of protein catabolic process SPBC2D10.12
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process SPBC2D10.12
GO:0042176
IEA
PLAZA Integrative Orthologyregulation of protein catabolic process SPBC2D10.12
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000119318
GO:0061136
IEA
PLAZA Integrative Orthologyregulation of proteasomal protein catabolic process ENSG00000119318
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process YEL037C
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process YEL037C
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process YEL037C
GO:0010243
IEA
PLAZA Integrative Orthologyresponse to organonitrogen compound YEL037C
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process YEL037C
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process SPBC2D10.12
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process ENSG00000179262
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization ENSG00000119318
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process YEL037C
GO:0019058
IEA
PLAZA Integrative Orthologyviral life cycle ENSG00000179262
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization ENSG00000119318
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process YEL037C
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000119318
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification YEL037C
GO:1901135
IEA
PLAZA Integrative Orthologycarbohydrate derivative metabolic process YEL037C
GO:0009266
IEA
PLAZA Integrative Orthologyresponse to temperature stimulus AT5G38470
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process SPBC2D10.12
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000119318
GO:0016579
IEA
PLAZA Integrative Orthologyprotein deubiquitination ENSG00000119318
GO:0036503
IEA
PLAZA Integrative OrthologyERAD pathway YEL037C
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process ENSG00000179262
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process ENSG00000179262
GO:0032268
IEA
PLAZA Integrative Orthologyregulation of cellular protein metabolic process ENSG00000119318
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process SPBC2D10.12
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process YEL037C
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YEL037C
GO:0009409
IEA
PLAZA Integrative Orthologyresponse to cold AT5G38470
GO:1901800
IEA
PLAZA Integrative Orthologypositive regulation of proteasomal protein catabolic process ENSG00000179262
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process SPBC2D10.12
GO:0009895
IEA
PLAZA Integrative Orthologynegative regulation of catabolic process SPBC2D10.12
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process ENSG00000179262
GO:0045787
IEA
PLAZA Integrative Orthologypositive regulation of cell cycle ENSG00000179262
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process YEL037C
GO:0000715
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA damage recognition ENSG00000119318
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process YEL037C
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process SPBC2D10.12
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process ENSG00000179262
GO:0000717
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA duplex unwinding ENSG00000119318
GO:0032392
IEA
PLAZA Integrative OrthologyDNA geometric change ENSG00000119318
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process YEL037C
GO:0032270
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein metabolic process ENSG00000179262
GO:0032434
IEA
PLAZA Integrative Orthologyregulation of proteasomal ubiquitin-dependent protein catabolic process ENSG00000119318
GO:0034976
IEA
PLAZA Integrative Orthologyresponse to endoplasmic reticulum stress YEL037C
GO:0032436
IEA
PLAZA Integrative Orthologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process ENSG00000179262
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription YEL037C
GO:0019079
IEA
PLAZA Integrative Orthologyviral genome replication ENSG00000179262
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process YEL037C
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process YEL037C
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process YEL037C
GO:0006457
IEA
PLAZA Integrative Orthologyprotein folding ENSG00000119318
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process YEL037C
GO:0048524
IEA
PLAZA Integrative Orthologypositive regulation of viral process ENSG00000179262
GO:0006294
IEA
PLAZA Integrative Orthologynucleotide-excision repair, preincision complex assembly ENSG00000119318
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly ENSG00000119318
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000119318
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance YEL037C
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000179262
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation SPBC2D10.12
GO:0051248
IEA
PLAZA Integrative Orthologynegative regulation of protein metabolic process SPBC2D10.12
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process YEL037C
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly ENSG00000119318
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process YEL037C
GO:0050792
IEA
PLAZA Integrative Orthologyregulation of viral process ENSG00000179262
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000179262
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated YEL037C
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process YEL037C
GO:0051247
IEA
PLAZA Integrative Orthologypositive regulation of protein metabolic process ENSG00000179262
GO:0051246
IEA
PLAZA Integrative Orthologyregulation of protein metabolic process SPBC2D10.12
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process YEL037C
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000179262
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process SPBC2D10.12
GO:1903364
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein catabolic process ENSG00000179262
GO:0043902
IEA
PLAZA Integrative Orthologypositive regulation of multi-organism process ENSG00000179262
GO:0043903
IEA
PLAZA Integrative Orthologyregulation of symbiosis, encompassing mutualism through parasitism ENSG00000179262
GO:0043900
IEA
PLAZA Integrative Orthologyregulation of multi-organism process ENSG00000179262
GO:1903362
IEA
PLAZA Integrative Orthologyregulation of cellular protein catabolic process ENSG00000119318

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0005515
IEA
InterProprotein binding
GO:0019899
IEA
PLAZA Integrative Orthologyenzyme binding ENSG00000179262
GO:0016787
IEA
PLAZA Integrative Orthologyhydrolase activity YEL037C
GO:0030674
IEA
PLAZA Integrative Orthologyprotein binding, bridging YEL037C
GO:0016811
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides YEL037C
GO:0016810
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds YEL037C
GO:0032182
IEA
PLAZA Integrative Orthologyubiquitin-like protein binding SPBC2D10.12
GO:0002020
IEA
PLAZA Integrative Orthologyprotease binding ENSG00000179262
GO:0140030
IEA
PLAZA Integrative Orthologymodification-dependent protein binding SPBC2D10.12
GO:0044877
IEA
PLAZA Integrative Orthologyprotein-containing complex binding AT5G38470
GO:0019900
IEA
PLAZA Integrative Orthologykinase binding ENSG00000179262
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity YEL037C
GO:0043130
IEA
PLAZA Integrative Orthologyubiquitin binding SPBC2D10.12
GO:0070628
IEA
PLAZA Integrative Orthologyproteasome binding AT5G38470
GO:0000224
IEA
PLAZA Integrative Orthologypeptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity YEL037C
GO:1990381
IEA
PLAZA Integrative Orthologyubiquitin-specific protease binding ENSG00000179262
GO:0031593
IEA
PLAZA Integrative Orthologypolyubiquitin modification-dependent protein binding SPBC2D10.12
GO:0060090
IEA
PLAZA Integrative Orthologymolecular adaptor activity YEL037C
GO:0003697
IEA
PLAZA Integrative Orthologysingle-stranded DNA binding ENSG00000119318

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system SPBC2D10.12
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part ENSG00000179262
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000119318
GO:0005815
IEA
PLAZA Integrative Orthologymicrotubule organizing center ENSG00000179262
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPBC2D10.12
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPBC2D10.12
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000119318
GO:1905368
IEA
PLAZA Integrative Orthologypeptidase complex YEL037C
GO:1905369
IEA
PLAZA Integrative Orthologyendopeptidase complex YEL037C
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex YEL037C
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YEL037C
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPBC2D10.12
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton ENSG00000179262
GO:0071942
IEA
PLAZA Integrative OrthologyXPC complex ENSG00000119318
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YEL037C
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPBC2D10.12
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton ENSG00000179262
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope SPBC2D10.12
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope SPBC2D10.12
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000119318
GO:1990391
IEA
PLAZA Integrative OrthologyDNA repair complex YEL037C
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000119318
GO:0000111
IEA
PLAZA Integrative Orthologynucleotide-excision repair factor 2 complex YEL037C
GO:0005635
IEA
PLAZA Integrative Orthologynuclear envelope SPBC2D10.12
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPBC2D10.12
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC2D10.12
GO:0000502
IEA
PLAZA Integrative Orthologyproteasome complex YEL037C
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle ENSG00000179262
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000119318
GO:0000109
IEA
PLAZA Integrative Orthologynucleotide-excision repair complex YEL037C
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle ENSG00000179262

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015360XPC-binding domain
IPR015940Ubiquitin-associated domain
IPR000626Ubiquitin domain
IPR004806UV excision repair protein Rad23
IPR009060UBA-like superfamily
IPR029071Ubiquitin-like domain superfamily

No MapMan annotations defined for this gene.
KeggID Description
K10839RAD23, HR23; UV excision repair protein RAD23
K18180COA7, SELRC1, RESA1; cytochrome c oxidase assembly factor 7
K20102YTHDF; YTH domain-containing family protein
No chloroplast target sequence found.