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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-07_007890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-07_007890
Ectocarpus siliculosus
0.0e+00
2450.2
2048
100.0
ptri226350
Phaeodactylum tricornutum
2.2e-39
167.2
817
24.6
fso91970
Fistulifera solaris
2.5e-35
153.7
1307
23.3
fso36300
Fistulifera solaris
1.2e-34
151.4
1314
23.1
CC00G159130
Cyclotella cryptica
3.1e-33
146.7
780
23.8
Pp3c10_350
Physcomitrella patens
6.4e-31
139.0
599
25.4
Pp3c14_1870
Physcomitrella patens
8.3e-31
138.7
598
25.3
AT1G32750
Arabidopsis thaliana
2.4e-30
137.1
611
24.5
Naga_100131g12
Nannochloropsis gaditana
4.3e-27
126.3
833
22.9
Sro1358_g265900
Seminavis robusta
4.3e-27
126.3
837
22.8
tho82440
Thalassiosira oceanica
1.6e-26
124.4
803
23.4
ps00G120730
Pseudo-nitzschia multiseries
1.7e-23
114.4
193
35.8
WBGene00006382
Caenorhabditis elegans
2.4e-22
110.5
680
22.8
PSNMU-V1.4_AUG-EV-PASAV3_0067010
Pseudo-nitzschia multistriata
4.6e-21
106.3
837
22.6
sya00G259470
Synedra acus
6.0e-21
105.9
1268
20.9
AT3G19040
Arabidopsis thaliana
1.0e-20
105.1
610
21.8
AA0001G06910
Aureococcus anophagefferens
1.6e-13
81.3
592
23.5
ENSG00000122728
Homo sapiens
1.1e-11
75.1
171
29.2
ENSG00000147133
Homo sapiens
1.5e-11
74.7
171
29.2
FBgn0010355
Drosophila melanogaster
1.3e-10
71.6
169
26.6
SPAC2G11.14
Schizosaccharomyces pombe
1.1e-09
68.6
321
23.7
SPAC631.02
Schizosaccharomyces pombe
7.6e-08
62.4
93
37.6
gene15400
Fragilariopsis cylindrus
4.9e-07
59.7
104
36.5
SPCC1450.02
Schizosaccharomyces pombe
1.1e-06
58.5
99
32.3
PSNMU-V1.4_AUG-EV-PASAV3_0110000
Pseudo-nitzschia multistriata
1.4e-06
58.2
91
38.5
pte440600
Paramecium tetraurelia
2.4e-06
57.4
75
38.7
ENSG00000009954
Homo sapiens
3.2e-06
57.0
139
34.5
pte28850
Paramecium tetraurelia
3.2e-06
57.0
75
40.0
pte517680
Paramecium tetraurelia
3.2e-06
57.0
75
40.0
AT3G27260
Arabidopsis thaliana
4.2e-06
56.6
124
32.3
ps00G93850
Pseudo-nitzschia multiseries
4.2e-06
56.6
91
38.5
ccr100380
Chondrus crispus
7.1e-06
55.8
97
35.1
emh365140
Emiliania huxleyi
9.3e-06
55.5
93
33.3
emh152840
Emiliania huxleyi
9.3e-06
55.5
93
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing