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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-05_003090
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-05_003090
Ectocarpus siliculosus
0.0e+00
1142.9
662
100.0
fso141930
Fistulifera solaris
7.8e-47
190.3
281
38.8
gene6992
Fragilariopsis cylindrus
1.3e-46
189.5
244
40.2
fso138530
Fistulifera solaris
1.3e-46
189.5
287
38.3
ptri164790
Phaeodactylum tricornutum
5.1e-46
187.6
275
38.2
Sro841_g209540
Seminavis robusta
8.6e-46
186.8
237
40.1
ENSG00000079387
Homo sapiens
1.8e-43
179.1
264
38.3
CC00G158770
Cyclotella cryptica
3.1e-43
178.3
277
36.1
sya00G88370
Synedra acus
4.0e-43
177.9
258
38.8
AA0016G00080
Aureococcus anophagefferens
1.2e-42
176.4
217
42.9
sya00G185670
Synedra acus
1.2e-42
176.4
257
38.5
ENSG00000163904
Homo sapiens
2.6e-42
175.3
235
40.4
ps00G167330
Pseudo-nitzschia multiseries
1.9e-40
169.1
241
37.3
tho14040
Thalassiosira oceanica
5.4e-40
167.5
292
36.3
tps209900
Thalassiosira pseudonana
3.0e-38
161.8
216
38.0
CM12G03240
Cyanidioschyzon merolae
4.3e-37
157.9
234
39.7
Naga_100031g30
Nannochloropsis gaditana
5.6e-37
157.5
265
34.0
emh643140
Emiliania huxleyi
7.6e-34
147.1
272
34.9
Pp3c22_12640
Physcomitrella patens
1.4e-32
142.9
281
33.8
gsu26750
Galdieria sulphuraria
4.2e-32
141.4
223
37.2
FBgn0027603
Drosophila melanogaster
1.6e-31
139.4
289
32.5
Ec-23_000900
Ectocarpus siliculosus
2.7e-31
138.7
235
34.5
FBgn0052110
Drosophila melanogaster
1.7e-30
136.0
237
34.2
AT3G06910
Arabidopsis thaliana
8.7e-30
133.7
236
35.6
Pp3c23_850
Physcomitrella patens
8.7e-30
133.7
237
35.9
Sro2088_g313920
Seminavis robusta
2.5e-29
132.1
245
35.9
WBGene00006736
Caenorhabditis elegans
4.3e-29
131.3
265
30.9
FBgn0031208
Drosophila melanogaster
4.3e-29
131.3
234
32.9
SPBC19G7.09
Schizosaccharomyces pombe
5.6e-29
131.0
222
35.1
Sro1825_g300040
Seminavis robusta
5.6e-29
131.0
245
35.9
Cre16.g692600
Chlamydomonas reinhardtii
1.3e-28
129.8
241
34.0
AT4G15880
Arabidopsis thaliana
1.4e-27
126.3
239
33.5
Sro528_g160890
Seminavis robusta
3.1e-27
125.2
245
35.1
AT4G00690
Arabidopsis thaliana
2.1e-23
112.5
223
33.2
YPL020C
Saccharomyces cerevisiae strain S288C
1.0e-22
110.2
228
31.1
ENSG00000119231
Homo sapiens
1.3e-22
109.8
201
33.8
AA0407G00010
Aureococcus anophagefferens
3.3e-21
105.1
137
37.2
ENSG00000161956
Homo sapiens
7.4e-21
104.0
204
32.4
ENSG00000277957
Homo sapiens
7.4e-21
104.0
204
32.4
Sro2455_g328190
Seminavis robusta
7.4e-21
104.0
186
34.4
emh140740
Emiliania huxleyi
3.7e-20
101.7
161
33.5
CM13G02970
Cyanidioschyzon merolae
1.4e-19
99.8
228
31.1
Sro2490_g329130
Seminavis robusta
2.0e-18
95.9
241
28.6
Sro2486_g329050
Seminavis robusta
3.4e-18
95.1
241
28.6
gsu36690
Galdieria sulphuraria
4.5e-18
94.7
252
25.4
ccr45340
Chondrus crispus
5.8e-18
94.4
321
25.9
gene150
Fragilariopsis cylindrus
1.7e-17
92.8
208
28.8
gene13320
Fragilariopsis cylindrus
3.8e-17
91.7
215
29.3
Sro1923_g305670
Seminavis robusta
1.1e-16
90.1
157
33.8
Pp3c25_3200
Physcomitrella patens
2.7e-15
85.5
271
27.3
Pp3c15_7620
Physcomitrella patens
1.0e-14
83.6
209
28.2
AA0346G00010
Aureococcus anophagefferens
3.0e-14
82.0
119
35.3
AT1G09730
Arabidopsis thaliana
3.0e-14
82.0
208
26.4
Pp3c9_9860
Physcomitrella patens
3.0e-14
82.0
210
27.6
Pp3c9_9780
Physcomitrella patens
3.0e-14
82.0
210
27.6
gene13536
Fragilariopsis cylindrus
1.9e-13
79.3
204
27.5
PSNMU-V1.4_AUG-EV-PASAV3_0018190
Pseudo-nitzschia multistriata
2.5e-13
79.0
235
29.8
Pp3c5_19870
Physcomitrella patens
2.5e-13
79.0
203
29.6
Sro3231_g345680
Seminavis robusta
4.3e-13
78.2
150
31.3
tho111180
Thalassiosira oceanica
7.4e-13
77.4
202
27.7
ccr77880
Chondrus crispus
1.3e-12
76.6
264
27.3
AT4G33620
Arabidopsis thaliana
4.8e-12
74.7
219
25.6
ps00G196550
Pseudo-nitzschia multiseries
4.8e-12
74.7
227
32.2
tho617440
Thalassiosira oceanica
5.3e-11
71.2
129
35.7
Cre06.g296350
Chlamydomonas reinhardtii
9.0e-11
70.5
104
35.6
PSNMU-V1.4_AUG-EV-PASAV3_0100190
Pseudo-nitzschia multistriata
1.5e-10
69.7
116
34.5
AT1G10570
Arabidopsis thaliana
2.6e-10
68.9
211
24.6
SPAC17A5.07c
Schizosaccharomyces pombe
8.4e-09
63.9
103
34.0
ENSG00000112701
Homo sapiens
2.5e-08
62.4
174
30.5
FBgn0030420
Drosophila melanogaster
7.1e-08
60.8
207
24.2
ENSG00000138468
Homo sapiens
1.2e-07
60.1
111
34.2
AA0063G00080
Aureococcus anophagefferens
2.3e-06
55.8
168
28.0
pte560210
Paramecium tetraurelia
5.1e-06
54.7
122
26.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (9 genes)
Synedra acus (2 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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