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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-04_005890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-04_005890
Ectocarpus siliculosus
0.0e+00
1958.0
1215
100.0
CC00G57950
Cyclotella cryptica
2.9e-87
325.5
760
32.2
tps177080
Thalassiosira pseudonana
4.9e-71
271.6
481
36.4
Pp3c5_12930
Physcomitrella patens
5.8e-56
221.5
554
34.8
AT4G32700
Arabidopsis thaliana
9.9e-56
220.7
501
34.9
Cre16.g664301
Chlamydomonas reinhardtii
2.8e-50
202.6
559
31.5
ENSG00000130997
Homo sapiens
2.7e-45
186.0
554
31.4
sya00G103470
Synedra acus
4.6e-45
185.3
504
30.8
FBgn0002905
Drosophila melanogaster
2.5e-43
179.5
554
30.1
CM20G04620
Cyanidioschyzon merolae
5.6e-43
178.3
506
31.8
ENSG00000051341
Homo sapiens
3.1e-41
172.6
614
27.0
ccr162300
Chondrus crispus
4.0e-41
172.2
481
29.9
WBGene00020964
Caenorhabditis elegans
3.3e-35
152.5
451
27.3
Naga_100120g21
Nannochloropsis gaditana
7.4e-35
151.4
269
37.2
CM15G02700
Cyanidioschyzon merolae
8.2e-26
121.3
321
31.5
Cre06.g257800
Chlamydomonas reinhardtii
4.1e-25
119.0
565
25.1
AA0012G01990
Aureococcus anophagefferens
6.9e-25
118.2
365
30.1
ccr16480
Chondrus crispus
6.9e-25
118.2
396
27.8
PSNMU-V1.4_AUG-EV-PASAV3_0102480
Pseudo-nitzschia multistriata
1.5e-24
117.1
327
29.4
emh673380
Emiliania huxleyi
2.6e-24
116.3
216
36.1
ps00G195800
Pseudo-nitzschia multiseries
2.6e-24
116.3
327
29.4
AT3G20540
Arabidopsis thaliana
5.0e-23
112.1
443
24.4
Cre17.g736150
Chlamydomonas reinhardtii
6.5e-23
111.7
337
29.4
Sro2579_g331800
Seminavis robusta
6.5e-23
111.7
322
29.5
CC00G55700
Cyclotella cryptica
3.2e-22
109.4
310
29.7
gene17026
Fragilariopsis cylindrus
3.2e-22
109.4
327
29.1
Pp3c14_14550
Physcomitrella patens
3.2e-22
109.4
344
28.8
tps70040
Thalassiosira pseudonana
4.2e-22
109.0
315
29.2
Cre08.g363837
Chlamydomonas reinhardtii
3.6e-21
105.9
271
31.4
AT1G50840
Arabidopsis thaliana
6.1e-21
105.1
328
26.8
emh585070
Emiliania huxleyi
1.0e-20
104.4
308
30.8
emh369160
Emiliania huxleyi
1.0e-20
104.4
308
30.8
ptri224060
Phaeodactylum tricornutum
1.4e-20
104.0
373
28.7
Pp3c24_16390
Physcomitrella patens
1.8e-20
103.6
359
27.0
fso06220
Fistulifera solaris
6.7e-20
101.7
414
25.8
fso51450
Fistulifera solaris
1.5e-19
100.5
414
26.1
pte131730
Paramecium tetraurelia
7.4e-19
98.2
319
27.6
pte586380
Paramecium tetraurelia
7.4e-19
98.2
319
27.6
Ec-02_003280
Ectocarpus siliculosus
2.2e-18
96.7
295
29.2
Pp3c8_21620
Physcomitrella patens
1.4e-17
94.0
344
27.3
sya00G18350
Synedra acus
1.4e-17
94.0
313
26.8
tho69460
Thalassiosira oceanica
6.5e-15
85.1
324
26.5
gsu103370
Galdieria sulphuraria
1.4e-14
84.0
307
22.8
emh354820
Emiliania huxleyi
2.3e-12
76.6
212
30.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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