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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CM07G01900
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CM07G01900
Cyanidioschyzon merolae
1.6e-282
973.0
565
100.0
ccr128240
Chondrus crispus
6.2e-69
263.5
322
46.6
gsu122750
Galdieria sulphuraria
7.3e-62
240.0
338
41.1
Naga_100011g51
Nannochloropsis gaditana
8.1e-61
236.5
396
36.6
Pp3c16_2890
Physcomitrella patens
8.1e-61
236.5
382
37.7
Cre04.g217922
Chlamydomonas reinhardtii
1.8e-60
235.3
337
41.2
AT1G65040
Arabidopsis thaliana
1.5e-59
232.3
359
38.7
AT3G16090
Arabidopsis thaliana
1.4e-57
225.7
427
34.2
gsu122730
Galdieria sulphuraria
4.2e-57
224.2
329
40.4
ENSG00000162298
Homo sapiens
1.7e-55
218.8
353
36.3
FBgn0039875
Drosophila melanogaster
7.6e-51
203.4
371
35.6
WBGene00004768
Caenorhabditis elegans
1.3e-45
186.0
321
35.5
AA0054G00050
Aureococcus anophagefferens
1.9e-38
162.2
305
35.4
emh327260
Emiliania huxleyi
2.8e-37
158.3
303
34.3
gene16176
Fragilariopsis cylindrus
2.5e-33
145.2
349
30.9
SPBC17D11.02c
Schizosaccharomyces pombe
5.5e-33
144.1
354
29.7
Sro6_g005140
Seminavis robusta
5.5e-33
144.1
367
31.6
gene4449
Fragilariopsis cylindrus
1.6e-32
142.5
375
30.1
fso72960
Fistulifera solaris
4.8e-29
131.0
378
30.4
fso117030
Fistulifera solaris
1.1e-28
129.8
378
29.9
ps00G146670
Pseudo-nitzschia multiseries
1.8e-28
129.0
363
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0044820
Pseudo-nitzschia multistriata
3.4e-27
124.8
335
29.3
ptri26120
Phaeodactylum tricornutum
3.4e-27
124.8
429
30.1
CC00G72160
Cyclotella cryptica
8.5e-26
120.2
488
26.6
tps27790
Thalassiosira pseudonana
1.9e-25
119.0
457
25.4
emh103250
Emiliania huxleyi
3.2e-25
118.2
240
32.9
sya00G39610
Synedra acus
5.5e-25
117.5
391
28.1
ENSG00000159461
Homo sapiens
8.2e-21
103.6
317
29.0
pte575230
Paramecium tetraurelia
1.1e-12
76.6
345
22.9
Pp3c13_9770
Physcomitrella patens
2.4e-12
75.5
322
24.8
AT4G25230
Arabidopsis thaliana
2.0e-11
72.4
259
26.6
pte505110
Paramecium tetraurelia
7.7e-11
70.5
341
22.6
Pp3c3_10340
Physcomitrella patens
2.9e-10
68.6
394
24.9
AT5G51450
Arabidopsis thaliana
3.8e-10
68.2
380
25.3
emh266500
Emiliania huxleyi
3.8e-10
68.2
79
40.5
ps00G93700
Pseudo-nitzschia multiseries
4.2e-09
64.7
143
34.3
gene20067
Fragilariopsis cylindrus
6.1e-08
60.8
167
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0056150
Pseudo-nitzschia multistriata
6.1e-08
60.8
164
32.3
YOL013C
Saccharomyces cerevisiae strain S288C
1.8e-07
59.3
436
23.4
AA0014G01990
Aureococcus anophagefferens
2.3e-07
58.9
48
45.8
CM09G01440
Cyanidioschyzon merolae
4.0e-07
58.2
123
32.5
Naga_100130g11
Nannochloropsis gaditana
4.0e-07
58.2
55
40.0
Sro22_g015460
Seminavis robusta
2.6e-06
55.5
114
36.0
emh742400
Emiliania huxleyi
4.4e-06
54.7
50
38.0
AT5G02750
Arabidopsis thaliana
7.5e-06
53.9
47
40.4
Pp3c25_7040
Physcomitrella patens
7.5e-06
53.9
79
35.4
Pp3c16_18430
Physcomitrella patens
7.5e-06
53.9
51
47.1
AT4G26400
Arabidopsis thaliana
9.7e-06
53.5
47
42.6
CC00G58730
Cyclotella cryptica
9.7e-06
53.5
69
39.1
ptri87800
Phaeodactylum tricornutum
9.7e-06
53.5
69
36.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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