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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G69060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G69060
Cyclotella cryptica
2.0e-126
453.0
209
100.0
tps130000
Thalassiosira pseudonana
9.6e-76
284.6
150
80.0
sya00G161050
Synedra acus
1.9e-63
243.8
152
68.4
tho217020
Thalassiosira oceanica
5.5e-63
242.3
211
57.3
Sro99_g050950
Seminavis robusta
2.1e-62
240.4
149
66.4
gene16313
Fragilariopsis cylindrus
2.7e-62
240.0
148
68.2
Sro968_g226070
Seminavis robusta
6.0e-62
238.8
149
67.1
ps00G33510
Pseudo-nitzschia multiseries
7.9e-62
238.4
152
67.1
fso77080
Fistulifera solaris
1.6e-59
230.7
181
56.4
ptri130290
Phaeodactylum tricornutum
3.7e-59
229.6
149
65.1
fso191720
Fistulifera solaris
1.0e-56
221.5
149
64.4
fso77050
Fistulifera solaris
1.7e-56
220.7
181
56.9
fso160310
Fistulifera solaris
7.2e-55
215.3
181
54.7
tps142420
Thalassiosira pseudonana
4.2e-47
189.5
147
52.4
tps193950
Thalassiosira pseudonana
3.3e-44
179.9
152
50.7
sya00G196410
Synedra acus
1.7e-40
167.5
180
40.0
Sro70_g039030
Seminavis robusta
5.0e-40
166.0
178
41.6
ptri72160
Phaeodactylum tricornutum
1.1e-39
164.9
239
36.4
CC00G149660
Cyclotella cryptica
4.2e-39
162.9
207
37.7
fso199510
Fistulifera solaris
1.6e-38
161.0
186
39.8
ps00G65070
Pseudo-nitzschia multiseries
1.6e-38
161.0
187
40.1
ptri69840
Phaeodactylum tricornutum
2.3e-37
157.1
193
36.3
Sro9_g007140
Seminavis robusta
5.2e-37
156.0
106
57.5
fso73640
Fistulifera solaris
1.5e-36
154.5
186
38.2
FBgn0031816
Drosophila melanogaster
4.8e-35
149.4
142
46.5
gene18213
Fragilariopsis cylindrus
4.8e-35
149.4
181
35.9
fso64760
Fistulifera solaris
2.6e-33
143.7
259
32.4
fso43770
Fistulifera solaris
5.9e-33
142.5
257
32.7
CC00G122160
Cyclotella cryptica
1.1e-31
138.3
113
50.4
Sro695_g188680
Seminavis robusta
2.5e-31
137.1
156
39.7
ENSG00000163743
Homo sapiens
4.8e-27
122.9
130
39.2
ccr65580
Chondrus crispus
4.5e-25
116.3
149
38.3
sya00G162130
Synedra acus
2.5e-23
110.5
162
34.6
Cre05.g248550
Chlamydomonas reinhardtii
2.1e-22
107.5
155
36.1
CM13G01410
Cyanidioschyzon merolae
8.0e-22
105.5
145
36.6
fso155640
Fistulifera solaris
6.8e-21
102.4
162
33.3
CC00G86210
Cyclotella cryptica
8.8e-21
102.1
162
32.7
fso150310
Fistulifera solaris
8.8e-21
102.1
197
31.0
tho328140
Thalassiosira oceanica
8.8e-21
102.1
87
48.3
Naga_100090g9
Nannochloropsis gaditana
3.4e-20
100.1
159
35.8
AT1G74770
Arabidopsis thaliana
9.8e-20
98.6
150
35.3
sya00G00440
Synedra acus
9.8e-20
98.6
64
60.9
AT3G18290
Arabidopsis thaliana
5.4e-18
92.8
187
29.9
ccr161060
Chondrus crispus
5.4e-18
92.8
147
34.0
SPAC2F3.16
Schizosaccharomyces pombe
1.2e-17
91.7
150
32.0
gsu76240
Galdieria sulphuraria
3.5e-17
90.1
147
32.7
pte243060
Paramecium tetraurelia
4.5e-17
89.7
155
32.3
Ec-26_004520
Ectocarpus siliculosus
5.9e-17
89.4
174
30.5
ccr36960
Chondrus crispus
1.7e-16
87.8
151
34.4
tps146910
Thalassiosira pseudonana
1.7e-16
87.8
116
37.1
tho87860
Thalassiosira oceanica
1.9e-15
84.3
178
29.8
AT1G18910
Arabidopsis thaliana
2.5e-15
84.0
149
30.2
Cre17.g718300
Chlamydomonas reinhardtii
4.2e-15
83.2
150
32.7
Pp3c10_4820
Physcomitrella patens
5.5e-15
82.8
148
30.4
AT3G62970
Arabidopsis thaliana
3.6e-14
80.1
147
29.9
AT5G22920
Arabidopsis thaliana
8.0e-14
79.0
158
27.2
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
1.4e-13
78.2
60
51.7
Pp3c14_5600
Physcomitrella patens
1.4e-13
78.2
166
28.3
Pp3c11_6970
Physcomitrella patens
1.8e-13
77.8
160
26.9
Pp3c1_6070
Physcomitrella patens
3.0e-13
77.0
158
28.5
ps00G05920
Pseudo-nitzschia multiseries
8.8e-13
75.5
164
26.8
Pp3c25_14501
Physcomitrella patens
4.4e-12
73.2
151
28.5
Pp3c25_14500
Physcomitrella patens
4.4e-12
73.2
151
28.5
AT5G18650
Arabidopsis thaliana
5.7e-12
72.8
147
26.5
Pp3c2_31820
Physcomitrella patens
5.7e-12
72.8
158
27.2
pte443830
Paramecium tetraurelia
7.5e-12
72.4
145
29.0
Pp3c6_1960
Physcomitrella patens
1.3e-11
71.6
151
28.5
pte760660
Paramecium tetraurelia
2.2e-11
70.9
86
39.5
ccr27680
Chondrus crispus
2.8e-11
70.5
155
28.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (5 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing