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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G60270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G60270
Cyclotella cryptica
0.0e+00
2791.5
1399
100.0
tps122870
Thalassiosira pseudonana
0.0e+00
1637.1
1789
52.4
sya00G103910
Synedra acus
0.0e+00
1160.2
1924
37.4
ptri15010
Phaeodactylum tricornutum
0.0e+00
1136.3
1909
37.0
CC00G135150
Cyclotella cryptica
0.0e+00
1122.8
557
100.0
fso174830
Fistulifera solaris
0.0e+00
1117.8
1853
37.2
fso66600
Fistulifera solaris
0.0e+00
1117.4
1939
36.3
Sro1830_g300310
Seminavis robusta
0.0e+00
1114.4
1962
36.0
PSNMU-V1.4_AUG-EV-PASAV3_0016970
Pseudo-nitzschia multistriata
0.0e+00
1076.2
1983
35.0
gene20466
Fragilariopsis cylindrus
1.6e-296
1020.8
1857
35.9
ps00G22320
Pseudo-nitzschia multiseries
1.7e-285
984.2
1772
34.9
Ec-10_005070
Ectocarpus siliculosus
4.1e-231
803.5
784
52.4
Naga_100125g10
Nannochloropsis gaditana
1.7e-216
755.0
815
50.2
AA0058G00020
Aureococcus anophagefferens
1.7e-197
691.8
762
48.3
FBgn0264326
Drosophila melanogaster
4.6e-182
640.6
721
48.0
AT1G08260
Arabidopsis thaliana
6.2e-179
630.2
710
48.6
ENSG00000177084
Homo sapiens
1.8e-178
628.6
761
44.4
AT2G27120
Arabidopsis thaliana
1.4e-175
619.0
726
47.4
SPBC25H2.13c
Schizosaccharomyces pombe
1.6e-174
615.5
754
42.2
Pp3c13_4500
Physcomitrella patens
2.7e-174
614.8
801
44.1
tho197820
Thalassiosira oceanica
1.5e-172
609.0
502
61.0
YNL262W
Saccharomyces cerevisiae strain S288C
5.7e-172
607.1
825
41.1
ccr171860
Chondrus crispus
3.6e-166
587.8
756
43.4
Cre03.g179961
Chlamydomonas reinhardtii
3.4e-161
571.2
598
50.5
WBGene00009368
Caenorhabditis elegans
2.7e-158
561.6
715
44.1
gsu133780
Galdieria sulphuraria
3.2e-151
538.1
772
40.4
CM17G00980
Cyanidioschyzon merolae
5.2e-149
530.8
722
41.7
pte125380
Paramecium tetraurelia
1.4e-133
479.6
728
38.2
emh452610
Emiliania huxleyi
2.7e-17
93.2
130
40.8
Ec-00_003210
Ectocarpus siliculosus
4.2e-10
69.3
184
27.2
tho409200
Thalassiosira oceanica
8.3e-06
55.1
44
56.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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