Gene: CC00G135150 (Cyclotella cryptica)

Overview top

Gene Identifier
CC00G135150
Transcript Identifier
CC00G135150.1
Gene Type
Coding gene
Location
g008117_00090 : 26-1697 : negative

Family Information

Homologous gene family
HOM02SEM001627
(36 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM001769
(35 genes in 26 species)
specific family

Descriptions

eggnog_description
DNA polymerase

Identifiers

Type Value
GeneNameg18967.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
InterProDNA repair
GO:0071169
IEA
EggNOGmapperestablishment of protein localization to chromatin
GO:0000082
IEA
EggNOGmapperG1/S transition of mitotic cell cycle
GO:0061458
IEA
EggNOGmapperreproductive system development
GO:0045892
IEA
EggNOGmappernegative regulation of transcription, DNA-templated
GO:0007399
IEA
EggNOGmappernervous system development
GO:0051329
IEA
EggNOGmappermitotic interphase
GO:0002009
IEA
EggNOGmappermorphogenesis of an epithelium
GO:0040011
IEA
EggNOGmapperlocomotion
GO:0010964
IEA
EggNOGmapperregulation of chromatin silencing by small RNA
GO:1901991
IEA
EggNOGmappernegative regulation of mitotic cell cycle phase transition
GO:0035822
IEA
EggNOGmappergene conversion
GO:0070868
IEA
EggNOGmapperheterochromatin organization involved in chromatin silencing
GO:0006283
IEA
EggNOGmappertranscription-coupled nucleotide-excision repair
GO:0006270
IEA
EggNOGmapperDNA replication initiation
GO:0000280
IEA
EggNOGmappernuclear division
GO:0043009
IEA
EggNOGmapperchordate embryonic development
GO:0006271
IEA
EggNOGmapperDNA strand elongation involved in DNA replication
GO:0022008
IEA
EggNOGmapperneurogenesis
GO:0042276
IEA
EggNOGmappererror-prone translesion synthesis
GO:0010833
IEA
EggNOGmappertelomere maintenance via telomere lengthening
GO:0000084
IEA
EggNOGmappermitotic S phase
GO:0006312
IEA
EggNOGmappermitotic recombination
GO:0090305
IEA
EggNOGmappernucleic acid phosphodiester bond hydrolysis
GO:0035265
IEA
EggNOGmapperorgan growth
GO:0007064
IEA
EggNOGmappermitotic sister chromatid cohesion
GO:0031573
IEA
EggNOGmapperintra-S DNA damage checkpoint
GO:0006272
IEA
EggNOGmapperleading strand elongation
GO:0006298
IEA
EggNOGmappermismatch repair
GO:0007548
IEA
EggNOGmappersex differentiation
GO:0006997
IEA
EggNOGmappernucleus organization
GO:0071168
IEA
EggNOGmapperprotein localization to chromatin
GO:0032201
IEA
EggNOGmappertelomere maintenance via semi-conservative replication
GO:0006287
IEA
EggNOGmapperbase-excision repair, gap-filling
GO:0048608
IEA
EggNOGmapperreproductive structure development
GO:0006273
IEA
EggNOGmapperlagging strand elongation
GO:0033314
IEA
EggNOGmappermitotic DNA replication checkpoint
GO:0000722
IEA
EggNOGmappertelomere maintenance via recombination
GO:0006303
IEA
EggNOGmapperdouble-strand break repair via nonhomologous end joining
GO:0006284
IEA
EggNOGmapperbase-excision repair
GO:0033260
IEA
EggNOGmappernuclear DNA replication
GO:0045004
IEA
EggNOGmapperDNA replication proofreading
GO:0006297
IEA
EggNOGmappernucleotide-excision repair, DNA gap filling
GO:0007113
IEA
EggNOGmapperendomitotic cell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
InterProDNA binding
GO:0003887
IEA
EggNOGmapperDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0043169
IEA
PLAZA Homology (enrichment)cation binding HOM02SEM001627
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM001627
GO:0043167
IEA
PLAZA Homology (enrichment)ion binding HOM02SEM001627
GO:1901265
IEA
PLAZA Homology (enrichment)nucleoside phosphate binding HOM02SEM001627
GO:0046872
IEA
PLAZA Homology (enrichment)metal ion binding HOM02SEM001627
GO:0008270
IEA
PLAZA Homology (enrichment)zinc ion binding HOM02SEM001627
GO:0046914
IEA
PLAZA Homology (enrichment)transition metal ion binding HOM02SEM001627
GO:0000166
IEA
PLAZA Homology (enrichment)nucleotide binding HOM02SEM001627
GO:0008310
IEA
EggNOGmappersingle-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0003690
IEA
EggNOGmapperdouble-stranded DNA binding
GO:0003682
IEA
EggNOGmapperchromatin binding
GO:0003697
IEA
EggNOGmappersingle-stranded DNA binding
GO:0016779
IEA
EggNOGmappernucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008622
IEA
EggNOGmapperepsilon DNA polymerase complex
GO:0008622
IEA
InterProepsilon DNA polymerase complex
GO:0044451
IEA
EggNOGmappernucleoplasm part
GO:0043596
IEA
EggNOGmappernuclear replication fork
GO:0031261
IEA
EggNOGmapperDNA replication preinitiation complex
GO:0000109
IEA
EggNOGmappernucleotide-excision repair complex
GO:0043601
IEA
EggNOGmappernuclear replisome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012337Ribonuclease H-like superfamily
IPR029703DNA polymerase epsilon catalytic subunit
IPR006133DNA-directed DNA polymerase, family B, exonuclease domain

No MapMan annotations defined for this gene.
KeggID Description
K02148ATPeV1C, ATP6C; V-type H+-transporting ATPase subunit C
K02324POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
No chloroplast target sequence found.