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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G170180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G170180
Cyclotella cryptica
1.2e-265
916.8
516
100.0
CC00G23260
Cyclotella cryptica
7.6e-207
721.5
365
100.0
tps214270
Thalassiosira pseudonana
3.8e-190
666.0
438
77.6
tho168500
Thalassiosira oceanica
4.2e-189
662.5
451
74.7
Sro3091_g343560
Seminavis robusta
2.6e-175
616.7
452
70.8
fso197580
Fistulifera solaris
8.5e-174
611.7
452
69.2
fso68850
Fistulifera solaris
1.2e-172
607.8
452
68.6
sya00G200940
Synedra acus
6.1e-172
605.5
449
69.5
sya00G10910
Synedra acus
1.8e-171
604.0
451
69.8
PSNMU-V1.4_AUG-EV-PASAV3_0121980
Pseudo-nitzschia multistriata
6.9e-168
592.0
451
69.6
ptri134850
Phaeodactylum tricornutum
5.0e-166
585.9
444
68.5
ps00G162750
Pseudo-nitzschia multiseries
9.4e-165
581.6
438
69.4
gene15202
Fragilariopsis cylindrus
3.3e-162
573.2
438
68.5
Naga_100011g15
Nannochloropsis gaditana
1.1e-149
531.6
449
61.2
Ec-18_001870
Ectocarpus siliculosus
9.8e-146
518.5
443
59.6
AA0055G00210
Aureococcus anophagefferens
1.2e-127
458.4
402
60.0
emh385270
Emiliania huxleyi
1.1e-93
345.5
472
45.6
ccr107320
Chondrus crispus
2.4e-83
311.2
407
42.8
gsu108510
Galdieria sulphuraria
6.9e-83
309.7
444
39.4
CM17G02750
Cyanidioschyzon merolae
9.3e-80
299.3
415
39.5
AT3G02660
Arabidopsis thaliana
1.5e-74
282.0
408
39.5
Cre13.g606050
Chlamydomonas reinhardtii
2.0e-74
281.6
457
35.9
emh142860
Emiliania huxleyi
7.6e-74
279.6
468
40.4
Pp3c3_3070
Physcomitrella patens
6.5e-73
276.6
409
38.1
Pp3s58_130
Physcomitrella patens
8.4e-73
276.2
438
37.0
FBgn0035064
Drosophila melanogaster
2.9e-65
251.1
382
38.0
ENSG00000139131
Homo sapiens
2.2e-60
235.0
374
36.4
CC00G165120
Cyclotella cryptica
3.4e-58
227.6
165
100.0
YPL097W
Saccharomyces cerevisiae strain S288C
5.1e-54
213.8
434
32.5
SPCC576.06c
Schizosaccharomyces pombe
3.9e-46
187.6
414
31.4
WBGene00006968
Caenorhabditis elegans
1.1e-43
179.5
451
29.0
pte521670
Paramecium tetraurelia
6.1e-31
137.1
299
32.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing