Gene: CC00G170180 (Cyclotella cryptica)

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Gene Identifier
CC00G170180
Transcript Identifier
CC00G170180.1
Gene Type
Coding gene
Location
g035804_00118 : 613-2323 : positive

Family Information

Homologous gene family
HOM02SEM000876
(53 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM002086
(32 genes in 26 species)
specific family

Descriptions

eggnog_description
tyrosyl-tRNA synthetase

Identifiers

Type Value
GeneNameg5038.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006437
IEA
EggNOGmappertyrosyl-tRNA aminoacylation
GO:0006437
IEA
InterProtyrosyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT3G02660
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT3G02660
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YPL097W
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT3G02660
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT3G02660
GO:0032543
IEA
PLAZA Integrative Orthologymitochondrial translation YPL097W
GO:0070184
IEA
PLAZA Integrative Orthologymitochondrial tyrosyl-tRNA aminoacylation YPL097W
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT3G02660
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT3G02660
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YPL097W
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT3G02660
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT3G02660
GO:0010154
IEA
EggNOGmapperfruit development
GO:0070127
IEA
PLAZA Integrative OrthologytRNA aminoacylation for mitochondrial protein translation YPL097W
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT3G02660
GO:0061458
IEA
EggNOGmapperreproductive system development
GO:0048316
IEA
PLAZA Integrative Orthologyseed development AT3G02660
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT3G02660
GO:0009793
IEA
EggNOGmapperembryo development ending in seed dormancy
GO:0009790
IEA
PLAZA Integrative Orthologyembryo development AT3G02660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004831
IEA
EggNOGmappertyrosine-tRNA ligase activity
GO:0004831
IEA
InterProtyrosine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0003723
IEA
InterProRNA binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0031406
IEA
PLAZA Integrative Orthologycarboxylic acid binding ENSG00000139131
GO:0000049
IEA
PLAZA Integrative OrthologytRNA binding ENSG00000139131
GO:0043177
IEA
PLAZA Integrative Orthologyorganic acid binding ENSG00000139131
GO:0042803
IEA
PLAZA Integrative Orthologyprotein homodimerization activity ENSG00000139131
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding ENSG00000139131
GO:0016597
IEA
PLAZA Integrative Orthologyamino acid binding ENSG00000139131
GO:0043169
IEA
PLAZA Integrative Orthologycation binding ENSG00000139131
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000139131
GO:0046983
IEA
PLAZA Integrative Orthologyprotein dimerization activity ENSG00000139131
GO:0072545
IEA
PLAZA Integrative Orthologytyrosine binding ENSG00000139131

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion SPCC576.06c
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPCC576.06c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPCC576.06c
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000139131
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPCC576.06c
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPCC576.06c
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000139131
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT3G02660
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT3G02660
GO:0009570
IEA
EggNOGmapperchloroplast stroma
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000139131
GO:0044451
IEA
PLAZA Integrative Orthologynucleoplasm part ENSG00000139131
GO:0005759
IEA
EggNOGmappermitochondrial matrix
GO:0005634
IEA
PLAZA Integrative Orthologynucleus ENSG00000139131
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPCC576.06c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPCC576.06c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPCC576.06c
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPCC576.06c
GO:0009507
IEA
EggNOGmapperchloroplast
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPCC576.06c
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT3G02660
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPCC576.06c
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT3G02660
GO:0016604
IEA
PLAZA Integrative Orthologynuclear body ENSG00000139131
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPCC576.06c
GO:0020011
IEA
EggNOGmapperapicoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002307Tyrosine-tRNA ligase
IPR002942RNA-binding S4 domain
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR024107Tyrosine-tRNA ligase, bacterial-type, type 1
IPR024088Tyrosine-tRNA ligase, bacterial-type
IPR002305Aminoacyl-tRNA synthetase, class Ic
IPR020863Membrane attack complex component/perforin domain, conserved site

No MapMan annotations defined for this gene.
KeggID Description
K01866YARS, tyrS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
No chloroplast target sequence found.