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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G152660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G152660
Cyclotella cryptica
1.4e-99
363.6
178
100.0
tps95040
Thalassiosira pseudonana
4.4e-61
235.7
113
95.6
tho188960
Thalassiosira oceanica
1.3e-60
234.2
163
71.8
PSNMU-V1.4_AUG-EV-PASAV3_0029770
Pseudo-nitzschia multistriata
6.1e-47
188.7
128
71.1
fso152430
Fistulifera solaris
6.8e-46
185.3
114
73.7
fso167960
Fistulifera solaris
8.8e-46
184.9
128
68.0
gene1530
Fragilariopsis cylindrus
2.6e-45
183.3
112
76.8
sya00G144780
Synedra acus
2.6e-45
183.3
116
72.4
ps00G19410
Pseudo-nitzschia multiseries
7.5e-45
181.8
112
75.0
Sro672_g185010
Seminavis robusta
1.1e-43
177.9
111
74.8
ptri229390
Phaeodactylum tricornutum
2.7e-42
173.3
115
70.4
Ec-00_001020
Ectocarpus siliculosus
4.1e-27
122.9
116
51.7
FBgn0004855
Drosophila melanogaster
4.0e-22
106.3
116
44.0
ENSG00000105258
Homo sapiens
8.9e-22
105.1
116
44.8
Naga_100060g8
Nannochloropsis gaditana
3.4e-21
103.2
121
47.9
AA0212G00010
Aureococcus anophagefferens
4.9e-20
99.4
119
43.7
AT3G16980
Arabidopsis thaliana
4.1e-19
96.3
112
41.1
AT4G16265
Arabidopsis thaliana
5.4e-19
95.9
112
42.0
WBGene00022400
Caenorhabditis elegans
7.0e-19
95.5
116
37.9
Pp3c18_17910
Physcomitrella patens
6.0e-18
92.4
118
39.8
YGL070C
Saccharomyces cerevisiae strain S288C
5.0e-17
89.4
108
43.5
CM07G01690
Cyanidioschyzon merolae
8.6e-17
88.6
125
39.2
emh716340
Emiliania huxleyi
2.1e-15
84.0
107
38.3
emh248950
Emiliania huxleyi
2.1e-15
84.0
107
38.3
ccr65020
Chondrus crispus
8.1e-15
82.0
126
33.3
Cre12.g505750
Chlamydomonas reinhardtii
3.4e-13
76.6
112
34.8
SPAPYUG7.04c
Schizosaccharomyces pombe
4.4e-13
76.3
107
42.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing