Gene: CC00G152660 (Cyclotella cryptica)

Overview top

Gene Identifier
CC00G152660
Transcript Identifier
CC00G152660.1
Gene Type
Coding gene
Location
g022958_00077 : 13750-14416 : negative

Family Information

Homologous gene family
HOM02SEM002561
(28 genes in 25 species)
specific family
Orthologous gene family
ORTHO02SEM002648
(28 genes in 25 species)
specific family

Descriptions

eggnog_description
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)

Identifiers

Type Value
GeneNameg9160.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006379
IEA
InterPromRNA cleavage
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0010564
IEA
PLAZA Integrative Orthologyregulation of cell cycle process FBgn0004855
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT4G16265
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0004855
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process AT4G16265
GO:0000375
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions ENSG00000105258
GO:0010608
IEA
PLAZA Integrative Orthologyposttranscriptional regulation of gene expression ENSG00000105258
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0004855
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle FBgn0004855
GO:0007167
IEA
PLAZA Integrative Orthologyenzyme linked receptor protein signaling pathway ENSG00000105258
GO:0036260
IEA
PLAZA Integrative OrthologyRNA capping ENSG00000105258
GO:0007166
IEA
PLAZA Integrative Orthologycell surface receptor signaling pathway ENSG00000105258
GO:0006352
IEA
PLAZA Integrative OrthologyDNA-templated transcription, initiation YGL070C
GO:0007169
IEA
PLAZA Integrative Orthologytransmembrane receptor protein tyrosine kinase signaling pathway ENSG00000105258
GO:0006354
IEA
PLAZA Integrative OrthologyDNA-templated transcription, elongation YGL070C
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction ENSG00000105258
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process ENSG00000105258
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus YGL070C
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process ENSG00000105258
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress YGL070C
GO:0016032
IEA
PLAZA Integrative Orthologyviral process ENSG00000105258
GO:0000086
IEA
PLAZA Integrative OrthologyG2/M transition of mitotic cell cycle FBgn0004855
GO:0044774
IEA
PLAZA Integrative Orthologymitotic DNA integrity checkpoint FBgn0004855
GO:0044772
IEA
PLAZA Integrative Orthologymitotic cell cycle phase transition FBgn0004855
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0004855
GO:0007399
IEA
EggNOGmappernervous system development
GO:0044773
IEA
EggNOGmappermitotic DNA damage checkpoint
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0004855
GO:0007154
IEA
PLAZA Integrative Orthologycell communication ENSG00000105258
GO:0009452
IEA
EggNOGmapper7-methylguanosine RNA capping
GO:0044818
IEA
PLAZA Integrative Orthologymitotic G2/M transition checkpoint FBgn0004855
GO:0044419
IEA
PLAZA Integrative Orthologyinterspecies interaction between organisms ENSG00000105258
GO:0016441
IEA
PLAZA Integrative Orthologyposttranscriptional gene silencing ENSG00000105258
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression AT4G16265
GO:0044770
IEA
PLAZA Integrative Orthologycell cycle phase transition FBgn0004855
GO:0048731
IEA
PLAZA Integrative Orthologysystem development FBgn0004855
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression AT4G16265
GO:0007346
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle FBgn0004855
GO:0044403
IEA
PLAZA Integrative Orthologysymbiont process ENSG00000105258
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process AT4G16265
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical ENSG00000105258
GO:0080188
IEA
EggNOGmapperRNA-directed DNA methylation
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process ENSG00000105258
GO:0006370
IEA
EggNOGmapper7-methylguanosine mRNA capping
GO:0035195
IEA
PLAZA Integrative Orthologygene silencing by miRNA ENSG00000105258
GO:0035194
IEA
PLAZA Integrative Orthologyposttranscriptional gene silencing by RNA ENSG00000105258
GO:0019827
IEA
PLAZA Integrative Orthologystem cell population maintenance ENSG00000105258
GO:0010972
IEA
PLAZA Integrative Orthologynegative regulation of G2/M transition of mitotic cell cycle FBgn0004855
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus ENSG00000105258
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle FBgn0004855
GO:0001192
IEA
PLAZA Integrative Orthologymaintenance of transcriptional fidelity during DNA-templated transcription elongation YGL070C
GO:0046782
IEA
PLAZA Integrative Orthologyregulation of viral transcription ENSG00000105258
GO:0001193
IEA
EggNOGmappermaintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter
GO:1902749
IEA
PLAZA Integrative Orthologyregulation of cell cycle G2/M phase transition FBgn0004855
GO:0060964
IEA
PLAZA Integrative Orthologyregulation of gene silencing by miRNA ENSG00000105258
GO:0006368
IEA
EggNOGmappertranscription elongation from RNA polymerase II promoter
GO:0000377
IEA
EggNOGmapperRNA splicing, via transesterification reactions with bulged adenosine as nucleophile
GO:0006367
IEA
EggNOGmappertranscription initiation from RNA polymerase II promoter
GO:0098781
IEA
PLAZA Integrative OrthologyncRNA transcription ENSG00000105258
GO:0060968
IEA
PLAZA Integrative Orthologyregulation of gene silencing ENSG00000105258
GO:0060966
IEA
PLAZA Integrative Orthologyregulation of gene silencing by RNA ENSG00000105258
GO:0008543
IEA
PLAZA Integrative Orthologyfibroblast growth factor receptor signaling pathway ENSG00000105258
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II SPAPYUG7.04c
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process FBgn0004855
GO:1902750
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle G2/M phase transition FBgn0004855
GO:0008380
IEA
PLAZA Integrative OrthologyRNA splicing ENSG00000105258
GO:0032259
IEA
PLAZA Integrative Orthologymethylation AT4G16265
GO:0098727
IEA
PLAZA Integrative Orthologymaintenance of cell number ENSG00000105258
GO:0031047
IEA
PLAZA Integrative Orthologygene silencing by RNA AT4G16265
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus YGL070C
GO:0006306
IEA
EggNOGmapperDNA methylation
GO:0006305
IEA
EggNOGmapperDNA alkylation
GO:0043414
IEA
PLAZA Integrative Orthologymacromolecule methylation AT4G16265
GO:0040029
IEA
EggNOGmapperregulation of gene expression, epigenetic
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress YGL070C
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification AT4G16265
GO:0006397
IEA
PLAZA Integrative OrthologymRNA processing ENSG00000105258
GO:0009301
IEA
PLAZA Integrative OrthologysnRNA transcription ENSG00000105258
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing ENSG00000105258
GO:0044344
IEA
PLAZA Integrative Orthologycellular response to fibroblast growth factor stimulus ENSG00000105258
GO:0031570
IEA
PLAZA Integrative OrthologyDNA integrity checkpoint FBgn0004855
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process AT4G16265
GO:0016458
IEA
PLAZA Integrative Orthologygene silencing AT4G16265
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process ENSG00000105258
GO:0031572
IEA
EggNOGmapperG2 DNA damage checkpoint
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process AT4G16265
GO:0035019
IEA
PLAZA Integrative Orthologysomatic stem cell population maintenance ENSG00000105258
GO:0016073
IEA
PLAZA Integrative OrthologysnRNA metabolic process ENSG00000105258
GO:0071310
IEA
PLAZA Integrative Orthologycellular response to organic substance ENSG00000105258
GO:0000398
IEA
EggNOGmappermRNA splicing, via spliceosome
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle FBgn0004855
GO:0006304
IEA
PLAZA Integrative OrthologyDNA modification AT4G16265
GO:0060147
IEA
PLAZA Integrative Orthologyregulation of posttranscriptional gene silencing ENSG00000105258
GO:0042795
IEA
PLAZA Integrative OrthologysnRNA transcription by RNA polymerase II ENSG00000105258
GO:0045786
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle FBgn0004855
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process AT4G16265
GO:0010389
IEA
PLAZA Integrative Orthologyregulation of G2/M transition of mitotic cell cycle FBgn0004855
GO:0023052
IEA
PLAZA Integrative Orthologysignaling ENSG00000105258
GO:0009719
IEA
PLAZA Integrative Orthologyresponse to endogenous stimulus ENSG00000105258
GO:0071363
IEA
PLAZA Integrative Orthologycellular response to growth factor stimulus ENSG00000105258
GO:0000075
IEA
PLAZA Integrative Orthologycell cycle checkpoint FBgn0004855
GO:0010948
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle process FBgn0004855
GO:0000077
IEA
PLAZA Integrative OrthologyDNA damage checkpoint FBgn0004855
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus YGL070C
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process FBgn0004855
GO:0048524
IEA
PLAZA Integrative Orthologypositive regulation of viral process ENSG00000105258
GO:0045930
IEA
PLAZA Integrative Orthologynegative regulation of mitotic cell cycle FBgn0004855
GO:1901991
IEA
EggNOGmappernegative regulation of mitotic cell cycle phase transition
GO:1901990
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle phase transition FBgn0004855
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance ENSG00000105258
GO:0044728
IEA
EggNOGmapperDNA methylation or demethylation
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT4G16265
GO:0050434
IEA
PLAZA Integrative Orthologypositive regulation of viral transcription ENSG00000105258
GO:0071774
IEA
PLAZA Integrative Orthologyresponse to fibroblast growth factor ENSG00000105258
GO:0071495
IEA
PLAZA Integrative Orthologycellular response to endogenous stimulus ENSG00000105258
GO:0050792
IEA
PLAZA Integrative Orthologyregulation of viral process ENSG00000105258
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000105258
GO:0019083
IEA
PLAZA Integrative Orthologyviral transcription ENSG00000105258
GO:1901988
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle phase transition FBgn0004855
GO:0019080
IEA
PLAZA Integrative Orthologyviral gene expression ENSG00000105258
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000105258
GO:1901987
IEA
PLAZA Integrative Orthologyregulation of cell cycle phase transition FBgn0004855
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process AT4G16265
GO:0022008
IEA
EggNOGmapperneurogenesis
GO:0006289
IEA
PLAZA Integrative Orthologynucleotide-excision repair YGL070C
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process FBgn0004855
GO:0006283
IEA
EggNOGmappertranscription-coupled nucleotide-excision repair
GO:0044839
IEA
PLAZA Integrative Orthologycell cycle G2/M phase transition FBgn0004855
GO:0007093
IEA
PLAZA Integrative Orthologymitotic cell cycle checkpoint FBgn0004855
GO:0043902
IEA
EggNOGmapperpositive regulation of multi-organism process
GO:0070848
IEA
PLAZA Integrative Orthologyresponse to growth factor ENSG00000105258
GO:0043903
IEA
EggNOGmapperregulation of symbiosis, encompassing mutualism through parasitism
GO:0007095
IEA
EggNOGmappermitotic G2 DNA damage checkpoint
GO:0043900
IEA
PLAZA Integrative Orthologyregulation of multi-organism process ENSG00000105258
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair YGL070C
GO:0010557
IEA
EggNOGmapperpositive regulation of macromolecule biosynthetic process
GO:0000280
IEA
EggNOGmappernuclear division
GO:0051254
IEA
EggNOGmapperpositive regulation of RNA metabolic process
GO:0044764
IEA
EggNOGmappermulti-organism cellular process
GO:0006468
IEA
EggNOGmapperprotein phosphorylation
GO:0031328
IEA
EggNOGmapperpositive regulation of cellular biosynthetic process
GO:2001141
IEA
EggNOGmapperregulation of RNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
EggNOGmapperzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016779
IEA
PLAZA Integrative Orthologynucleotidyltransferase activity SPAPYUG7.04c
GO:0003899
IEA
EggNOGmapperDNA-directed 5'-3' RNA polymerase activity
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity SPAPYUG7.04c
GO:0140098
IEA
PLAZA Integrative Orthologycatalytic activity, acting on RNA SPAPYUG7.04c
GO:0097747
IEA
PLAZA Integrative OrthologyRNA polymerase activity SPAPYUG7.04c
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity SPAPYUG7.04c
GO:0034062
IEA
PLAZA Integrative Orthology5'-3' RNA polymerase activity SPAPYUG7.04c
GO:0016772
IEA
PLAZA Integrative Orthologytransferase activity, transferring phosphorus-containing groups SPAPYUG7.04c
GO:0003968
IEA
PLAZA Integrative OrthologyRNA-directed 5'-3' RNA polymerase activity YGL070C

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAPYUG7.04c
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex SPAPYUG7.04c
GO:0005665
IEA
EggNOGmapperRNA polymerase II, core complex
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAPYUG7.04c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAPYUG7.04c
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPAPYUG7.04c
GO:0055029
IEA
PLAZA Integrative Orthologynuclear DNA-directed RNA polymerase complex SPAPYUG7.04c
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm SPAPYUG7.04c
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex SPAPYUG7.04c
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPAPYUG7.04c
GO:0000428
IEA
PLAZA Integrative OrthologyDNA-directed RNA polymerase complex SPAPYUG7.04c
GO:0005829
IEA
EggNOGmappercytosol
GO:0000418
IEA
EggNOGmapperRNA polymerase IV complex
GO:0000419
IEA
EggNOGmapperRNA polymerase V complex
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAPYUG7.04c
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAPYUG7.04c
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAPYUG7.04c
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAPYUG7.04c
GO:0030880
IEA
PLAZA Integrative OrthologyRNA polymerase complex SPAPYUG7.04c
GO:0016591
IEA
PLAZA Integrative OrthologyRNA polymerase II, holoenzyme SPAPYUG7.04c
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPAPYUG7.04c
GO:0044451
IEA
PLAZA Integrative Orthologynucleoplasm part SPAPYUG7.04c
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAPYUG7.04c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAPYUG7.04c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAPYUG7.04c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAPYUG7.04c
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAPYUG7.04c
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAPYUG7.04c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAPYUG7.04c
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAPYUG7.04c
GO:0061695
IEA
PLAZA Integrative Orthologytransferase complex, transferring phosphorus-containing groups SPAPYUG7.04c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAPYUG7.04c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR034012Pol II subunit B9, C-terminal zinc ribbon
IPR001222Zinc finger, TFIIS-type

No MapMan annotations defined for this gene.
KeggID Description
K03017RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
No chloroplast target sequence found.