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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G108390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G108390
Cyclotella cryptica
0.0e+00
1653.6
824
100.0
tps96360
Thalassiosira pseudonana
0.0e+00
1322.8
737
88.1
tho09120
Thalassiosira oceanica
1.3e-306
1053.5
632
80.5
ptri207600
Phaeodactylum tricornutum
7.4e-289
994.6
772
63.0
Sro1631_g287220
Seminavis robusta
2.0e-278
959.9
748
61.2
PSNMU-V1.4_AUG-EV-PASAV3_0035030
Pseudo-nitzschia multistriata
3.2e-268
926.0
755
60.4
gene8165
Fragilariopsis cylindrus
1.2e-265
917.5
733
61.8
ps00G134480
Pseudo-nitzschia multiseries
1.9e-260
900.2
755
58.9
fso110980
Fistulifera solaris
4.7e-259
895.6
746
57.9
fso01860
Fistulifera solaris
2.0e-257
890.2
747
58.0
sya00G15890
Synedra acus
1.6e-243
844.0
601
68.1
Naga_100007g108
Nannochloropsis gaditana
2.3e-181
637.5
780
44.1
sya00G43140
Synedra acus
6.0e-113
410.2
295
67.5
ENSG00000204084
Homo sapiens
9.5e-111
402.9
677
34.1
ENSG00000122126
Homo sapiens
2.0e-108
395.2
694
33.3
gsu65700
Galdieria sulphuraria
1.3e-88
329.3
745
30.6
Ec-26_000170
Ectocarpus siliculosus
7.1e-82
307.0
396
43.4
CM04G00800
Cyanidioschyzon merolae
4.0e-77
291.2
691
31.1
FBgn0023508
Drosophila melanogaster
6.5e-75
283.9
652
30.4
WBGene00007620
Caenorhabditis elegans
8.5e-67
256.9
634
29.7
ccr40360
Chondrus crispus
3.2e-58
228.4
792
27.1
ENSG00000159082
Homo sapiens
1.3e-51
206.5
445
32.8
AT2G01900
Arabidopsis thaliana
2.2e-51
205.7
349
36.1
ENSG00000078269
Homo sapiens
3.8e-51
204.9
446
30.9
AT2G37440
Arabidopsis thaliana
1.1e-50
203.4
365
35.1
WBGene00006763
Caenorhabditis elegans
1.4e-50
203.0
358
34.1
Ec-09_000920
Ectocarpus siliculosus
1.9e-50
202.6
637
26.7
FBgn0034691
Drosophila melanogaster
9.4e-50
200.3
399
32.8
Ec-11_006280
Ectocarpus siliculosus
1.8e-48
196.1
560
28.8
YNL106C
Saccharomyces cerevisiae strain S288C
3.3e-47
191.8
400
31.5
YOR109W
Saccharomyces cerevisiae strain S288C
2.2e-46
189.1
350
33.1
SPBC2G2.02
Schizosaccharomyces pombe
9.1e-45
183.7
361
33.2
emh105190
Emiliania huxleyi
1.0e-43
180.3
722
25.5
AT1G65580
Arabidopsis thaliana
1.3e-43
179.9
490
30.6
Pp3c1_32995
Physcomitrella patens
2.2e-43
179.1
487
29.0
Pp3c1_32990
Physcomitrella patens
2.2e-43
179.1
487
29.0
AT2G43900
Arabidopsis thaliana
1.5e-42
176.4
567
27.7
SPAC9G1.10c
Schizosaccharomyces pombe
2.5e-42
175.6
353
32.9
AT5G65090
Arabidopsis thaliana
5.5e-42
174.5
251
39.8
AT3G63240
Arabidopsis thaliana
4.7e-41
171.4
457
29.3
Cre07.g352400
Chlamydomonas reinhardtii
6.1e-41
171.0
541
26.1
AT5G04980
Arabidopsis thaliana
2.3e-40
169.1
443
28.4
Pp3c16_2270
Physcomitrella patens
5.2e-40
167.9
438
30.4
pte466450
Paramecium tetraurelia
1.5e-39
166.4
358
30.7
AT4G18010
Arabidopsis thaliana
2.0e-39
166.0
257
38.9
pte549610
Paramecium tetraurelia
3.3e-39
165.2
390
29.7
AT1G05470
Arabidopsis thaliana
5.7e-39
164.5
252
36.5
AT2G32010
Arabidopsis thaliana
5.7e-39
164.5
272
36.0
FBgn0034179
Drosophila melanogaster
1.3e-38
163.3
387
31.5
Pp3c27_3390
Physcomitrella patens
3.7e-38
161.8
273
33.7
ENSG00000185133
Homo sapiens
1.4e-37
159.8
343
30.6
AT1G34120
Arabidopsis thaliana
7.0e-37
157.5
258
34.1
pte586100
Paramecium tetraurelia
2.0e-36
156.0
388
27.1
ENSG00000165458
Homo sapiens
4.5e-36
154.8
380
30.0
Pp3c22_8620
Physcomitrella patens
1.3e-35
153.3
283
33.9
emh746130
Emiliania huxleyi
2.9e-35
152.1
357
31.1
AT1G71710
Arabidopsis thaliana
2.5e-34
149.1
250
35.6
ENSG00000168918
Homo sapiens
2.5e-34
149.1
353
29.5
ENSG00000281614
Homo sapiens
2.5e-34
149.1
353
29.5
AT2G31830
Arabidopsis thaliana
4.2e-34
148.3
515
26.6
Pp3c18_13030
Physcomitrella patens
4.2e-34
148.3
275
33.8
emh741740
Emiliania huxleyi
1.2e-33
146.7
338
31.4
AT1G05630
Arabidopsis thaliana
2.1e-33
146.0
512
26.2
YIL002C
Saccharomyces cerevisiae strain S288C
1.0e-32
143.7
375
27.5
Pp3c19_21170
Physcomitrella patens
2.3e-32
142.5
267
34.1
Pp3c2_9260
Physcomitrella patens
2.3e-32
142.5
340
30.9
SPBC577.13
Schizosaccharomyces pombe
4.0e-32
141.7
359
27.6
AA0012G02080
Aureococcus anophagefferens
5.2e-32
141.4
162
46.3
Pp3c21_6740
Physcomitrella patens
6.8e-32
141.0
272
32.0
Pp3c21_20640
Physcomitrella patens
8.8e-32
140.6
327
31.2
Pp3c17_16770
Physcomitrella patens
2.0e-31
139.4
340
30.0
Pp3c1_31610
Physcomitrella patens
2.0e-31
139.4
340
30.9
ccr45360
Chondrus crispus
7.5e-31
137.5
379
29.6
Pp3c18_1400
Physcomitrella patens
1.3e-30
136.7
236
36.9
emh230600
Emiliania huxleyi
4.8e-30
134.8
267
33.3
ccr144180
Chondrus crispus
1.6e-28
129.8
365
29.6
emh607630
Emiliania huxleyi
3.5e-28
128.6
265
33.2
ENSG00000132376
Homo sapiens
5.9e-28
127.9
355
28.7
Cre12.g530050
Chlamydomonas reinhardtii
1.7e-27
126.3
419
27.0
emh168010
Emiliania huxleyi
1.9e-26
122.9
339
29.5
Naga_100058g10
Nannochloropsis gaditana
7.2e-26
120.9
353
32.0
pte155260
Paramecium tetraurelia
2.1e-25
119.4
412
25.2
pte241180
Paramecium tetraurelia
1.4e-24
116.7
367
25.3
tho181820
Thalassiosira oceanica
1.2e-23
113.6
452
25.2
Cre13.g563550
Chlamydomonas reinhardtii
1.7e-22
109.8
284
29.9
fso62760
Fistulifera solaris
2.8e-22
109.0
340
28.2
emh470710
Emiliania huxleyi
6.3e-22
107.8
306
29.1
fso98070
Fistulifera solaris
1.1e-21
107.1
342
28.7
emh210980
Emiliania huxleyi
1.8e-21
106.3
249
30.9
FBgn0036273
Drosophila melanogaster
3.1e-21
105.5
397
28.7
pte441160
Paramecium tetraurelia
3.1e-21
105.5
365
24.1
AT1G47510
Arabidopsis thaliana
5.4e-21
104.8
322
28.9
pte701430
Paramecium tetraurelia
5.4e-21
104.8
360
25.3
Sro1296_g260340
Seminavis robusta
2.0e-20
102.8
399
26.3
pte735150
Paramecium tetraurelia
2.7e-20
102.4
357
26.1
tps215610
Thalassiosira pseudonana
1.3e-19
100.1
256
30.1
ptri174050
Phaeodactylum tricornutum
1.7e-19
99.8
279
27.2
CC00G123270
Cyclotella cryptica
6.6e-19
97.8
380
25.5
sya00G107600
Synedra acus
6.6e-19
97.8
282
31.2
Cre11.g467546
Chlamydomonas reinhardtii
1.1e-18
97.1
142
38.7
PSNMU-V1.4_AUG-EV-PASAV3_0076400
Pseudo-nitzschia multistriata
1.1e-18
97.1
275
30.9
Ec-16_002520
Ectocarpus siliculosus
1.5e-18
96.7
229
32.8
pte393890
Paramecium tetraurelia
1.5e-18
96.7
346
24.0
ps00G104910
Pseudo-nitzschia multiseries
7.3e-18
94.4
292
30.5
CC00G52380
Cyclotella cryptica
1.8e-16
89.7
309
24.9
pte557850
Paramecium tetraurelia
1.8e-16
89.7
372
22.3
emh351860
Emiliania huxleyi
4.0e-16
88.6
289
27.7
WBGene00012016
Caenorhabditis elegans
5.4e-13
78.2
258
26.7
AA0013G01530
Aureococcus anophagefferens
1.2e-12
77.0
125
37.6
ccr123620
Chondrus crispus
4.6e-12
75.1
218
29.8
Sro506_g156370
Seminavis robusta
7.8e-12
74.3
352
24.1
WBGene00086546
Caenorhabditis elegans
1.7e-11
73.2
298
24.8
AA0005G02790
Aureococcus anophagefferens
4.0e-08
62.0
176
30.7
AA0007G00400
Aureococcus anophagefferens
2.0e-07
59.7
70
38.6
gene6356
Fragilariopsis cylindrus
2.6e-07
59.3
93
36.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (9 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing