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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G104210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G104210
Cyclotella cryptica
1.6e-272
939.5
455
100.0
tho48380
Thalassiosira oceanica
3.6e-112
406.8
477
48.8
PSNMU-V1.4_AUG-EV-PASAV3_0083380
Pseudo-nitzschia multistriata
2.3e-82
307.8
469
39.0
sya00G06640
Synedra acus
5.1e-82
306.6
467
39.8
ptri222780
Phaeodactylum tricornutum
7.4e-81
302.8
410
40.2
ps00G33070
Pseudo-nitzschia multiseries
2.8e-80
300.8
408
40.7
Sro646_g180810
Seminavis robusta
2.8e-80
300.8
415
38.1
Sro229_g093120
Seminavis robusta
5.1e-74
280.0
408
36.5
fso123280
Fistulifera solaris
2.6e-65
251.1
405
36.3
fso152550
Fistulifera solaris
1.2e-59
232.3
409
34.5
PSNMU-V1.4_AUG-EV-PASAV3_0080180
Pseudo-nitzschia multistriata
1.5e-41
172.2
173
46.2
tps119280
Thalassiosira pseudonana
2.5e-20
101.7
53
79.2
ptri222820
Phaeodactylum tricornutum
2.2e-16
88.6
55
61.8
ps00G59070
Pseudo-nitzschia multiseries
1.4e-15
85.9
100
42.0
gene16586
Fragilariopsis cylindrus
4.1e-15
84.3
54
61.1
gene630
Fragilariopsis cylindrus
1.6e-14
82.4
101
41.6
ps00G59060
Pseudo-nitzschia multiseries
1.7e-13
79.0
45
66.7
gene629
Fragilariopsis cylindrus
2.3e-13
78.6
45
66.7
Pp3c6_8120
Physcomitrella patens
7.3e-12
73.6
48
56.2
Pp3c5_19640
Physcomitrella patens
7.3e-12
73.6
71
45.1
Ec-12_006400
Ectocarpus siliculosus
1.6e-11
72.4
47
51.1
Cre08.g380151
Chlamydomonas reinhardtii
8.1e-11
70.1
50
54.0
AT3G01460
Arabidopsis thaliana
1.4e-10
69.3
49
55.1
fso197560
Fistulifera solaris
1.4e-10
69.3
47
57.4
Pp3c2_35750
Physcomitrella patens
1.4e-10
69.3
48
54.2
Ec-10_002390
Ectocarpus siliculosus
2.4e-10
68.6
47
57.4
Pp3c1_860
Physcomitrella patens
3.1e-10
68.2
100
39.0
Sro1496_g277520
Seminavis robusta
3.1e-10
68.2
45
55.6
AT1G77250
Arabidopsis thaliana
4.0e-10
67.8
46
50.0
fso68870
Fistulifera solaris
4.0e-10
67.8
47
55.3
CM19G01600
Cyanidioschyzon merolae
6.9e-10
67.0
45
55.6
gsu78360
Galdieria sulphuraria
6.9e-10
67.0
45
55.6
gsu78380
Galdieria sulphuraria
6.9e-10
67.0
45
55.6
ENSG00000198604
Homo sapiens
8.9e-10
66.6
46
45.7
Ec-16_001440
Ectocarpus siliculosus
1.5e-09
65.9
74
47.3
AA0020G00350
Aureococcus anophagefferens
2.6e-09
65.1
61
49.2
FBgn0031759
Drosophila melanogaster
3.4e-09
64.7
45
46.7
YJR119C
Saccharomyces cerevisiae strain S288C
5.8e-09
63.9
84
33.3
Cre12.g514250
Chlamydomonas reinhardtii
7.6e-09
63.5
64
39.1
FBgn0033636
Drosophila melanogaster
9.9e-09
63.2
51
43.1
Cre08.g377200
Chlamydomonas reinhardtii
1.3e-08
62.8
69
40.6
Cre02.g095045
Chlamydomonas reinhardtii
1.3e-08
62.8
45
51.1
ENSG00000073614
Homo sapiens
1.3e-08
62.8
45
53.3
FBgn0027620
Drosophila melanogaster
1.7e-08
62.4
45
51.1
Pp3c24_14110
Physcomitrella patens
1.7e-08
62.4
47
51.1
ENSG00000070047
Homo sapiens
2.2e-08
62.0
65
46.2
ENSG00000117139
Homo sapiens
2.2e-08
62.0
132
34.8
ENSG00000274780
Homo sapiens
2.2e-08
62.0
65
46.2
SPBP19A11.06
Schizosaccharomyces pombe
2.2e-08
62.0
93
32.3
CM12G03130
Cyanidioschyzon merolae
2.9e-08
61.6
64
40.6
ENSG00000126012
Homo sapiens
3.8e-08
61.2
45
48.9
Cre13.g592100
Chlamydomonas reinhardtii
4.9e-08
60.8
51
43.1
FBgn0262519
Drosophila melanogaster
4.9e-08
60.8
75
38.7
emh718520
Emiliania huxleyi
4.9e-08
60.8
78
37.2
emh673440
Emiliania huxleyi
4.9e-08
60.8
78
37.2
ptri140290
Phaeodactylum tricornutum
4.9e-08
60.8
106
36.8
ENSG00000123636
Homo sapiens
6.4e-08
60.5
45
44.4
WBGene00000482
Caenorhabditis elegans
1.1e-07
59.7
79
34.2
CM05G01420
Cyanidioschyzon merolae
1.1e-07
59.7
99
36.4
ENSG00000009954
Homo sapiens
1.1e-07
59.7
56
37.5
Sro216_g089260
Seminavis robusta
1.1e-07
59.7
63
42.9
emh580690
Emiliania huxleyi
1.4e-07
59.3
45
46.7
gene10211
Fragilariopsis cylindrus
1.4e-07
59.3
48
45.8
ENSG00000012817
Homo sapiens
1.9e-07
58.9
45
46.7
Pp3c10_2280
Physcomitrella patens
1.9e-07
58.9
116
31.9
gene13404
Fragilariopsis cylindrus
2.4e-07
58.5
66
42.4
Pp3c14_2650
Physcomitrella patens
2.4e-07
58.5
82
36.6
pte739670
Paramecium tetraurelia
2.4e-07
58.5
48
45.8
Cre05.g235400
Chlamydomonas reinhardtii
3.2e-07
58.2
45
42.2
FBgn0037344
Drosophila melanogaster
3.2e-07
58.2
58
36.2
emh694290
Emiliania huxleyi
3.2e-07
58.2
45
44.4
ENSG00000048649
Homo sapiens
3.2e-07
58.2
48
43.8
ENSG00000171634
Homo sapiens
3.2e-07
58.2
59
44.1
Cre09.g398141
Chlamydomonas reinhardtii
4.2e-07
57.8
45
42.2
CC00G160670
Cyclotella cryptica
4.2e-07
57.8
58
41.4
fso193920
Fistulifera solaris
4.2e-07
57.8
51
43.1
pte701320
Paramecium tetraurelia
4.2e-07
57.8
48
45.8
pte734960
Paramecium tetraurelia
4.2e-07
57.8
48
45.8
sya00G148780
Synedra acus
4.2e-07
57.8
47
48.9
fso106920
Fistulifera solaris
5.4e-07
57.4
51
43.1
Pp3c21_10100
Physcomitrella patens
7.1e-07
57.0
63
38.1
AT5G24330
Arabidopsis thaliana
9.3e-07
56.6
67
35.8
FBgn0023395
Drosophila melanogaster
9.3e-07
56.6
48
45.8
ENSG00000147854
Homo sapiens
9.3e-07
56.6
72
40.3
Naga_100140g5
Nannochloropsis gaditana
9.3e-07
56.6
60
43.3
CC00G169430
Cyclotella cryptica
1.2e-06
56.2
47
44.7
CC00G198170
Cyclotella cryptica
1.2e-06
56.2
47
44.7
gsu111690
Galdieria sulphuraria
1.2e-06
56.2
42
52.4
ENSG00000076108
Homo sapiens
1.2e-06
56.2
45
44.4
Pp3c21_10500
Physcomitrella patens
1.6e-06
55.8
63
38.1
Cre10.g455600
Chlamydomonas reinhardtii
2.7e-06
55.1
54
42.6
FBgn0000541
Drosophila melanogaster
2.7e-06
55.1
64
42.2
gene10212
Fragilariopsis cylindrus
2.7e-06
55.1
45
44.4
ENSG00000276043
Homo sapiens
2.7e-06
55.1
47
42.6
WBGene00002637
Caenorhabditis elegans
4.6e-06
54.3
80
35.0
tho206560
Thalassiosira oceanica
4.6e-06
54.3
58
39.7
tps158400
Thalassiosira pseudonana
4.6e-06
54.3
45
46.7
Ec-18_002550
Ectocarpus siliculosus
6.0e-06
53.9
60
40.0
CC00G168460
Cyclotella cryptica
7.8e-06
53.5
47
40.4
emh07290
Emiliania huxleyi
7.8e-06
53.5
52
38.5
Ec-05_002750
Ectocarpus siliculosus
7.8e-06
53.5
53
39.6
PSNMU-V1.4_AUG-EV-PASAV3_0090040
Pseudo-nitzschia multistriata
7.8e-06
53.5
47
51.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (14 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (2 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (8 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing