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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G64730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G64730
Arabidopsis thaliana
1.7e-121
437.2
300
100.0
Pp3c23_12950
Physcomitrella patens
9.9e-58
225.3
297
66.7
Cre16.g675301
Chlamydomonas reinhardtii
4.2e-48
193.4
297
56.9
emh622180
Emiliania huxleyi
9.3e-40
165.6
293
33.4
WBGene00018014
Caenorhabditis elegans
1.1e-37
158.7
286
29.4
AA0017G00230
Aureococcus anophagefferens
1.5e-37
158.3
313
30.7
ENSG00000123154
Homo sapiens
1.5e-37
158.3
295
52.5
gsu122870
Galdieria sulphuraria
1.9e-37
157.9
302
39.7
FBgn0028897
Drosophila melanogaster
6.3e-36
152.9
271
55.0
emh29410
Emiliania huxleyi
1.8e-35
151.4
282
32.6
Naga_100324g3
Nannochloropsis gaditana
2.0e-29
131.3
350
25.1
ptri205320
Phaeodactylum tricornutum
5.3e-27
123.2
330
27.3
Sro512_g157610
Seminavis robusta
6.1e-23
109.8
139
36.0
fso193960
Fistulifera solaris
1.0e-22
109.0
315
25.4
ccr141140
Chondrus crispus
1.8e-22
108.2
165
33.3
pte493450
Paramecium tetraurelia
1.7e-20
101.7
287
23.3
fso106960
Fistulifera solaris
4.8e-20
100.1
171
32.2
gene6319
Fragilariopsis cylindrus
1.2e-18
95.5
315
24.4
PSNMU-V1.4_AUG-EV-PASAV3_0064160
Pseudo-nitzschia multistriata
1.3e-17
92.0
179
30.2
ps00G07220
Pseudo-nitzschia multiseries
5.0e-17
90.1
328
29.3
AT4G02730
Arabidopsis thaliana
6.1e-15
83.2
116
37.1
tho348660
Thalassiosira oceanica
1.0e-14
82.4
187
30.5
sya00G144290
Synedra acus
2.6e-13
77.8
302
22.2
tps221770
Thalassiosira pseudonana
2.6e-13
77.8
182
27.5
CC00G44750
Cyclotella cryptica
2.8e-12
74.3
138
29.7
SPBC713.05
Schizosaccharomyces pombe
4.1e-11
70.5
120
29.2
pte407880
Paramecium tetraurelia
2.6e-10
67.8
159
27.0
pte449650
Paramecium tetraurelia
5.9e-10
66.6
159
27.0
Pp3c7_3690
Physcomitrella patens
1.0e-09
65.9
134
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0115430
Pseudo-nitzschia multistriata
1.7e-09
65.1
123
36.6
Pp3c15_21840
Physcomitrella patens
6.5e-09
63.2
151
27.2
ccr123820
Chondrus crispus
1.1e-08
62.4
147
27.9
WBGene00019427
Caenorhabditis elegans
1.9e-08
61.6
164
26.8
Pp3c10_3720
Physcomitrella patens
1.2e-07
58.9
212
25.0
tho336760
Thalassiosira oceanica
1.2e-07
58.9
158
27.8
Cre02.g113250
Chlamydomonas reinhardtii
1.6e-07
58.5
98
29.6
emh601940
Emiliania huxleyi
1.6e-07
58.5
77
35.1
Naga_100083g16
Nannochloropsis gaditana
2.1e-07
58.2
114
29.8
FBgn0034274
Drosophila melanogaster
2.7e-07
57.8
121
24.0
Sro85_g045230
Seminavis robusta
2.7e-07
57.8
126
30.2
tps197950
Thalassiosira pseudonana
2.7e-07
57.8
167
25.7
emh570520
Emiliania huxleyi
4.7e-07
57.0
147
27.9
emh131950
Emiliania huxleyi
4.7e-07
57.0
147
27.9
emh34890
Emiliania huxleyi
4.7e-07
57.0
147
27.9
Pp3c1_22090
Physcomitrella patens
4.7e-07
57.0
212
24.1
WBGene00008586
Caenorhabditis elegans
6.1e-07
56.6
168
24.4
ps00G89220
Pseudo-nitzschia multiseries
6.1e-07
56.6
133
31.6
pte602220
Paramecium tetraurelia
6.1e-07
56.6
111
27.0
Ec-14_000250
Ectocarpus siliculosus
8.0e-07
56.2
141
27.7
gsu23080
Galdieria sulphuraria
1.0e-06
55.8
61
37.7
Naga_100025g37
Nannochloropsis gaditana
1.0e-06
55.8
128
26.6
Pp3c21_4780
Physcomitrella patens
1.0e-06
55.8
132
27.3
pte668240
Paramecium tetraurelia
1.0e-06
55.8
111
27.0
CM12G02170
Cyanidioschyzon merolae
1.8e-06
55.1
60
38.3
AT5G50230
Arabidopsis thaliana
3.0e-06
54.3
159
26.4
emh765410
Emiliania huxleyi
3.0e-06
54.3
144
31.2
ENSG00000035681
Homo sapiens
3.0e-06
54.3
158
25.9
AT3G49180
Arabidopsis thaliana
4.0e-06
53.9
128
24.2
CM03G01590
Cyanidioschyzon merolae
4.0e-06
53.9
87
28.7
Pp3c2_19830
Physcomitrella patens
4.0e-06
53.9
84
31.0
tps77780
Thalassiosira pseudonana
4.0e-06
53.9
108
28.7
Naga_100019g27
Nannochloropsis gaditana
5.2e-06
53.5
106
30.2
SPBC6B1.10
Schizosaccharomyces pombe
5.2e-06
53.5
80
30.0
tps127330
Thalassiosira pseudonana
5.2e-06
53.5
124
27.4
FBgn0013548
Drosophila melanogaster
8.8e-06
52.8
111
27.0
fso107290
Fistulifera solaris
8.8e-06
52.8
54
37.0
pte21870
Paramecium tetraurelia
8.8e-06
52.8
135
25.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing