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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G27620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G27620
Arabidopsis thaliana
1.3e-178
627.1
337
100.0
Pp3c5_10610
Physcomitrella patens
1.2e-83
311.6
302
55.0
Pp3c27_2950
Physcomitrella patens
1.4e-73
278.1
254
54.7
ENSG00000134480
Homo sapiens
9.8e-30
132.5
305
31.1
gsu119480
Galdieria sulphuraria
5.6e-25
116.7
306
29.1
YPR025C
Saccharomyces cerevisiae strain S288C
1.2e-22
109.0
249
29.3
FBgn0022936
Drosophila melanogaster
1.5e-22
108.6
243
31.3
sya00G100270
Synedra acus
8.3e-21
102.8
358
26.5
Cre14.g632783
Chlamydomonas reinhardtii
1.9e-20
101.7
193
29.5
Sro2691_g334780
Seminavis robusta
2.7e-19
97.8
280
28.9
fso95630
Fistulifera solaris
1.6e-16
88.6
330
25.2
ps00G124390
Pseudo-nitzschia multiseries
3.6e-16
87.4
346
25.7
fso148200
Fistulifera solaris
1.1e-15
85.9
254
27.6
WBGene00021714
Caenorhabditis elegans
1.4e-15
85.5
251
27.9
Naga_100003g63
Nannochloropsis gaditana
5.2e-15
83.6
177
29.4
SPBP16F5.02
Schizosaccharomyces pombe
5.2e-15
83.6
240
26.2
tho87080
Thalassiosira oceanica
9.2e-12
72.8
277
23.8
CC00G209930
Cyclotella cryptica
1.6e-11
72.0
205
26.8
ptri50470
Phaeodactylum tricornutum
1.3e-10
68.9
209
25.4
tps108920
Thalassiosira pseudonana
1.3e-10
68.9
204
25.0
AT5G48640
Arabidopsis thaliana
2.3e-10
68.2
182
26.9
ccr14960
Chondrus crispus
3.9e-10
67.4
243
26.3
AT5G48630
Arabidopsis thaliana
8.7e-10
66.2
178
27.5
Cre03.g174476
Chlamydomonas reinhardtii
1.9e-09
65.1
187
26.2
ENSG00000112237
Homo sapiens
9.6e-09
62.8
257
26.5
FBgn0004597
Drosophila melanogaster
2.1e-08
61.6
196
28.1
Pp3c24_1910
Physcomitrella patens
1.1e-07
59.3
239
23.8
Pp3c23_12870
Physcomitrella patens
1.4e-07
58.9
215
25.6
YNL025C
Saccharomyces cerevisiae strain S288C
2.0e-06
55.1
256
25.0
WBGene00000506
Caenorhabditis elegans
7.6e-06
53.1
222
23.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing