Gene: AT5G27620 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G27620
Transcript Identifier
AT5G27620.1
Gene Type
Coding gene
Location
5 : 9771762-9774684 : positive

Family Information

Homologous gene family
HOM02SEM002812
(26 genes in 22 species)
specific family
Orthologous gene family
ORTHO02SEM003008
(26 genes in 22 species)
specific family

Descriptions

Description
cyclin H;1
Curated Summary
core cell cycle genes
Show more...

Identifiers

Type Value
uniprotQ8W5S1
aliasCYCH;1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:2000070
IMP
Gene Ontologyregulation of response to water deprivation1 2
GO:1990069
IMP
Gene Ontologystomatal opening1 2
GO:0072593
IMP
Gene Ontologyreactive oxygen species metabolic process1 2
GO:0010119
IMP
Gene Ontologyregulation of stomatal movement1 2
GO:0009637
IMP
Gene Ontologyresponse to blue light1 2
GO:0009414
IMP
Gene Ontologyresponse to water deprivation1 2
GO:0006355
IEP
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0051726
ISS
Gene Ontologyregulation of cell cycle3
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair ENSG00000134480
GO:0044839
IEA
PLAZA Integrative Orthologycell cycle G2/M phase transition ENSG00000134480
GO:0006283
IEA
PLAZA Integrative Orthologytranscription-coupled nucleotide-excision repair ENSG00000134480
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process ENSG00000134480
GO:0006289
IEA
PLAZA Integrative Orthologynucleotide-excision repair ENSG00000134480
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process SPBP16F5.02
GO:0051246
IEA
PLAZA Integrative Orthologyregulation of protein metabolic process SPBP16F5.02
GO:0051247
IEA
PLAZA Integrative Orthologypositive regulation of protein metabolic process SPBP16F5.02
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process SPBP16F5.02
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated ENSG00000134480
GO:0050790
IEA
PLAZA Integrative Orthologyregulation of catalytic activity SPBP16F5.02
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly ENSG00000134480
GO:0045937
IEA
PLAZA Integrative Orthologypositive regulation of phosphate metabolic process SPBP16F5.02
GO:1902680
IEA
PLAZA Integrative Orthologypositive regulation of RNA biosynthetic process ENSG00000134480
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000134480
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process ENSG00000134480
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000134480
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly ENSG00000134480
GO:0006294
IEA
PLAZA Integrative Orthologynucleotide-excision repair, preincision complex assembly ENSG00000134480
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus ENSG00000134480
GO:0044843
IEA
PLAZA Integrative Orthologycell cycle G1/S phase transition ENSG00000134480
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function SPBP16F5.02
GO:0043085
IEA
PLAZA Integrative Orthologypositive regulation of catalytic activity SPBP16F5.02
GO:0051254
IEA
PLAZA Integrative Orthologypositive regulation of RNA metabolic process ENSG00000134480
GO:0032270
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein metabolic process SPBP16F5.02
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process SPBP16F5.02
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process ENSG00000134480
GO:0045944
IEA
PLAZA Integrative Orthologypositive regulation of transcription by RNA polymerase II ENSG00000134480
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle ENSG00000134480
GO:0016071
IEA
PLAZA Integrative OrthologymRNA metabolic process ENSG00000134480
GO:0019220
IEA
PLAZA Integrative Orthologyregulation of phosphate metabolic process SPBP16F5.02
GO:0032268
IEA
PLAZA Integrative Orthologyregulation of cellular protein metabolic process SPBP16F5.02
GO:0042327
IEA
PLAZA Integrative Orthologypositive regulation of phosphorylation SPBP16F5.02
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000134480
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing ENSG00000134480
GO:0006793
IEA
PLAZA Integrative Orthologyphosphorus metabolic process SPBP16F5.02
GO:0006397
IEA
PLAZA Integrative OrthologymRNA processing ENSG00000134480
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification SPBP16F5.02
GO:0006796
IEA
PLAZA Integrative Orthologyphosphate-containing compound metabolic process SPBP16F5.02
GO:0042325
IEA
PLAZA Integrative Orthologyregulation of phosphorylation SPBP16F5.02
GO:1901407
IEA
PLAZA Integrative Orthologyregulation of phosphorylation of RNA polymerase II C-terminal domain SPBP16F5.02
GO:1901409
IEA
PLAZA Integrative Orthologypositive regulation of phosphorylation of RNA polymerase II C-terminal domain SPBP16F5.02
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process ENSG00000134480
GO:0001932
IEA
PLAZA Integrative Orthologyregulation of protein phosphorylation SPBP16F5.02
GO:0001934
IEA
PLAZA Integrative Orthologypositive regulation of protein phosphorylation SPBP16F5.02
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus ENSG00000134480
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process SPBP16F5.02
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization ENSG00000134480
GO:0043549
IEA
PLAZA Integrative Orthologyregulation of kinase activity SPBP16F5.02
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process SPBP16F5.02
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process ENSG00000134480
GO:0006361
IEA
PLAZA Integrative Orthologytranscription initiation from RNA polymerase I promoter ENSG00000134480
GO:0006362
IEA
PLAZA Integrative Orthologytranscription elongation from RNA polymerase I promoter ENSG00000134480
GO:0006360
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase I ENSG00000134480
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000134480
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process SPBP16F5.02
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II SPBP16F5.02
GO:0006363
IEA
PLAZA Integrative Orthologytermination of RNA polymerase I transcription ENSG00000134480
GO:0006367
IEA
PLAZA Integrative Orthologytranscription initiation from RNA polymerase II promoter ENSG00000134480
GO:0006368
IEA
PLAZA Integrative Orthologytranscription elongation from RNA polymerase II promoter ENSG00000134480
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000134480
GO:0031399
IEA
PLAZA Integrative Orthologyregulation of protein modification process SPBP16F5.02
GO:0045859
IEA
PLAZA Integrative Orthologyregulation of protein kinase activity SPBP16F5.02
GO:0006370
IEA
PLAZA Integrative Orthology7-methylguanosine mRNA capping ENSG00000134480
GO:1904029
IEA
PLAZA Integrative Orthologyregulation of cyclin-dependent protein kinase activity SPBP16F5.02
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process ENSG00000134480
GO:0044093
IEA
PLAZA Integrative Orthologypositive regulation of molecular function SPBP16F5.02
GO:0045860
IEA
PLAZA Integrative Orthologypositive regulation of protein kinase activity SPBP16F5.02
GO:0051174
IEA
PLAZA Integrative Orthologyregulation of phosphorus metabolic process SPBP16F5.02
GO:0010628
IEA
PLAZA Integrative Orthologypositive regulation of gene expression ENSG00000134480
GO:0044770
IEA
PLAZA Integrative Orthologycell cycle phase transition ENSG00000134480
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000134480
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000134480
GO:0051338
IEA
PLAZA Integrative Orthologyregulation of transferase activity SPBP16F5.02
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process SPBP16F5.02
GO:1904031
IEA
PLAZA Integrative Orthologypositive regulation of cyclin-dependent protein kinase activity SPBP16F5.02
GO:0009452
IEA
PLAZA Integrative Orthology7-methylguanosine RNA capping ENSG00000134480
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process SPBP16F5.02
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process SPBP16F5.02
GO:0044772
IEA
PLAZA Integrative Orthologymitotic cell cycle phase transition ENSG00000134480
GO:0006468
IEA
PLAZA Integrative Orthologyprotein phosphorylation SPBP16F5.02
GO:0000079
IEA
PLAZA Integrative Orthologyregulation of cyclin-dependent protein serine/threonine kinase activity FBgn0022936
GO:0000086
IEA
PLAZA Integrative OrthologyG2/M transition of mitotic cell cycle ENSG00000134480
GO:0000082
IEA
PLAZA Integrative OrthologyG1/S transition of mitotic cell cycle ENSG00000134480
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress ENSG00000134480
GO:0033674
IEA
PLAZA Integrative Orthologypositive regulation of kinase activity SPBP16F5.02
GO:0016310
IEA
PLAZA Integrative Orthologyphosphorylation SPBP16F5.02
GO:0010557
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule biosynthetic process ENSG00000134480
GO:0051347
IEA
PLAZA Integrative Orthologypositive regulation of transferase activity SPBP16F5.02
GO:0070816
IEA
PLAZA Integrative Orthologyphosphorylation of RNA polymerase II C-terminal domain SPBP16F5.02
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process SPBP16F5.02
GO:0006354
IEA
PLAZA Integrative OrthologyDNA-templated transcription, elongation ENSG00000134480
GO:0006352
IEA
PLAZA Integrative OrthologyDNA-templated transcription, initiation ENSG00000134480
GO:0036260
IEA
PLAZA Integrative OrthologyRNA capping ENSG00000134480
GO:0006353
IEA
PLAZA Integrative OrthologyDNA-templated transcription, termination ENSG00000134480
GO:0006357
IEA
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II SPBP16F5.02
GO:1903508
IEA
PLAZA Integrative Orthologypositive regulation of nucleic acid-templated transcription ENSG00000134480
GO:0031647
IEA
PLAZA Integrative Orthologyregulation of protein stability ENSG00000134480
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process SPBP16F5.02
GO:0050821
IEA
PLAZA Integrative Orthologyprotein stabilization ENSG00000134480
GO:0010562
IEA
PLAZA Integrative Orthologypositive regulation of phosphorus metabolic process SPBP16F5.02
GO:0031401
IEA
PLAZA Integrative Orthologypositive regulation of protein modification process SPBP16F5.02
GO:0071900
IEA
PLAZA Integrative Orthologyregulation of protein serine/threonine kinase activity FBgn0022936

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016538
IEA
InterProcyclin-dependent protein serine/threonine kinase regulator activity
GO:0005515
IPI
Gene Ontologyprotein binding4 5 6 7
GO:0004672
IDA
Gene Ontologyprotein kinase activity4 5
GO:0004693
ISS
Gene Ontologycyclin-dependent protein serine/threonine kinase activity3
GO:0016887
IEA
PLAZA Integrative OrthologyATPase activity ENSG00000134480
GO:0061575
IEA
PLAZA Integrative Orthologycyclin-dependent protein serine/threonine kinase activator activity SPBP16F5.02
GO:0019914
IEA
PLAZA Integrative Orthologycyclin-dependent protein kinase activating kinase regulator activity SPBP16F5.02
GO:0016251
IEA
PLAZA Integrative OrthologyRNA polymerase II general transcription initiation factor activity SPBP16F5.02
GO:0140110
IEA
PLAZA Integrative Orthologytranscription regulator activity SPBP16F5.02
GO:0008353
IEA
PLAZA Integrative OrthologyRNA polymerase II CTD heptapeptide repeat kinase activity ENSG00000134480
GO:0140223
IEA
PLAZA Integrative Orthologygeneral transcription initiation factor activity SPBP16F5.02
GO:0008047
IEA
PLAZA Integrative Orthologyenzyme activator activity SPBP16F5.02
GO:0019209
IEA
PLAZA Integrative Orthologykinase activator activity SPBP16F5.02
GO:0016462
IEA
PLAZA Integrative Orthologypyrophosphatase activity ENSG00000134480
GO:0042623
IEA
PLAZA Integrative OrthologyATPase activity, coupled ENSG00000134480
GO:0030295
IEA
PLAZA Integrative Orthologyprotein kinase activator activity SPBP16F5.02
GO:0008094
IEA
PLAZA Integrative OrthologyDNA-dependent ATPase activity ENSG00000134480
GO:0016817
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides ENSG00000134480
GO:0016818
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ENSG00000134480
GO:0017111
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase activity ENSG00000134480
GO:0016787
IEA
PLAZA Integrative Orthologyhydrolase activity ENSG00000134480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070985
IEA
InterProtranscription factor TFIIK complex
GO:0005634
IDA
ISM
Gene Ontologynucleus1 2 4 5 8
GO:0005737
IDA
Gene Ontologycytoplasm4 5
GO:0019908
IEA
PLAZA Integrative Orthologynuclear cyclin-dependent protein kinase holoenzyme complex ENSG00000134480
GO:0019907
IEA
PLAZA Integrative Orthologycyclin-dependent protein kinase activating kinase holoenzyme complex ENSG00000134480
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YPR025C
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YPR025C
GO:0150005
IEA
PLAZA Integrative Orthologyenzyme activator complex ENSG00000134480
GO:0000307
IEA
PLAZA Integrative Orthologycyclin-dependent protein kinase holoenzyme complex ENSG00000134480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013763Cyclin-like
IPR027081CyclinH/Ccl1
IPR006671Cyclin, N-terminal
IPR031658Cyclin, C-terminal domain 2

No MapMan annotations defined for this gene.
KeggID Description
K06634CCNH; cyclin H
No chloroplast target sequence found.