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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G06680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G06680
Arabidopsis thaliana
0.0e+00
1633.2
839
100.0
Pp3c20_16750
Physcomitrella patens
5.4e-271
935.3
843
56.8
Pp3c24_16220
Physcomitrella patens
2.5e-268
926.4
882
54.6
ENSG00000126216
Homo sapiens
1.2e-124
449.1
920
32.4
gsu85750
Galdieria sulphuraria
1.2e-103
379.4
775
31.2
Cre11.g467745
Chlamydomonas reinhardtii
2.8e-94
348.2
761
32.7
emh763790
Emiliania huxleyi
1.4e-85
319.3
892
30.0
FBgn0001612
Drosophila melanogaster
1.2e-81
306.2
664
29.8
SPBC428.20c
Schizosaccharomyces pombe
8.9e-80
300.1
856
27.3
pte316560
Paramecium tetraurelia
1.7e-78
295.8
677
27.6
pte263930
Paramecium tetraurelia
4.1e-77
291.2
671
28.0
Naga_100060g14
Nannochloropsis gaditana
7.8e-76
287.0
558
33.5
pte73500
Paramecium tetraurelia
4.7e-73
277.7
663
27.6
pte344330
Paramecium tetraurelia
5.8e-71
270.8
659
26.7
Ec-01_012030
Ectocarpus siliculosus
5.8e-63
244.2
622
29.1
CC00G49290
Cyclotella cryptica
1.2e-57
226.5
715
27.1
Pp3c8_15910
Physcomitrella patens
2.8e-57
225.3
240
51.2
fso116280
Fistulifera solaris
3.6e-57
224.9
717
26.5
tps174470
Thalassiosira pseudonana
8.9e-56
220.3
736
25.8
fso25450
Fistulifera solaris
1.7e-54
216.1
715
26.4
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
3.8e-54
214.9
705
25.1
ps00G07860
Pseudo-nitzschia multiseries
3.8e-54
214.9
729
23.7
gene13257
Fragilariopsis cylindrus
1.0e-51
206.8
724
24.4
ptri173770
Phaeodactylum tricornutum
8.6e-51
203.8
696
25.0
Sro101_g051510
Seminavis robusta
2.4e-48
195.7
781
23.9
sya00G96190
Synedra acus
2.8e-41
172.2
553
25.5
AT5G17410
Arabidopsis thaliana
6.9e-40
167.5
572
26.2
ENSG00000130640
Homo sapiens
2.6e-39
165.6
703
24.2
Pp3c8_20000
Physcomitrella patens
1.9e-34
149.4
635
24.4
YNL126W
Saccharomyces cerevisiae strain S288C
1.9e-34
149.4
526
21.1
ptri91750
Phaeodactylum tricornutum
2.4e-32
142.5
665
23.6
Pp3c23_1190
Physcomitrella patens
3.1e-32
142.1
638
24.8
FBgn0026430
Drosophila melanogaster
5.3e-32
141.4
657
22.7
sya00G73720
Synedra acus
1.6e-28
129.8
526
25.1
Pp3c14_20420
Physcomitrella patens
5.1e-27
124.8
473
24.7
gsu84670
Galdieria sulphuraria
1.1e-26
123.6
574
23.0
gene13733
Fragilariopsis cylindrus
1.9e-26
122.9
685
22.2
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
6.2e-25
117.9
643
20.5
fso119530
Fistulifera solaris
1.1e-24
117.1
622
23.0
Pp3c13_20568
Physcomitrella patens
2.0e-23
112.8
584
23.6
Pp3c13_20560
Physcomitrella patens
2.0e-23
112.8
584
23.6
ps00G06430
Pseudo-nitzschia multiseries
2.0e-23
112.8
641
21.1
fso30500
Fistulifera solaris
1.3e-22
110.2
617
23.0
ENSG00000128159
Homo sapiens
3.2e-21
105.5
261
28.7
ENSG00000137822
Homo sapiens
2.1e-20
102.8
602
21.8
Sro50_g029000
Seminavis robusta
2.7e-20
102.4
686
21.9
Pp3c8_15940
Physcomitrella patens
6.7e-19
97.8
124
46.8
AT3G53760
Arabidopsis thaliana
4.3e-18
95.1
401
25.4
CC00G57600
Cyclotella cryptica
4.8e-17
91.7
689
19.3
gsu132140
Galdieria sulphuraria
6.3e-17
91.3
641
22.5
tps159260
Thalassiosira pseudonana
1.8e-16
89.7
584
20.0
AT1G37010
Arabidopsis thaliana
9.0e-16
87.4
49
85.7
FBgn0026431
Drosophila melanogaster
9.0e-16
87.4
439
20.0
Ec-01_012010
Ectocarpus siliculosus
2.2e-14
82.8
179
30.2
Cre01.g019150
Chlamydomonas reinhardtii
1.4e-13
80.1
351
24.5
SPBC365.15
Schizosaccharomyces pombe
5.5e-13
78.2
459
20.5
FBgn0035800
Drosophila melanogaster
3.6e-12
75.5
620
20.0
Pp3c11_24620
Physcomitrella patens
1.3e-11
73.6
298
21.8
FBgn0026432
Drosophila melanogaster
2.5e-10
69.3
147
27.9
Naga_100001g52
Nannochloropsis gaditana
4.3e-10
68.6
206
26.2
pte494070
Paramecium tetraurelia
7.4e-10
67.8
256
22.7
ENSG00000275835
Homo sapiens
1.3e-09
67.0
289
23.2
ENSG00000276856
Homo sapiens
1.3e-09
67.0
289
23.2
Pp3c13_8820
Physcomitrella patens
1.7e-09
66.6
262
24.0
AT1G80260
Arabidopsis thaliana
4.8e-09
65.1
286
22.4
FBgn0028901
Drosophila melanogaster
2.4e-08
62.8
486
20.6
ccr11280
Chondrus crispus
4.5e-07
58.5
155
24.5
AT1G20570
Arabidopsis thaliana
2.9e-06
55.8
289
21.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing