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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G02075
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G02075
Arabidopsis thaliana
2.0e-100
366.7
184
100.0
AT1G02610
Arabidopsis thaliana
2.9e-67
256.5
191
66.0
AT2G01275
Arabidopsis thaliana
9.2e-29
128.6
173
38.2
AT5G38070
Arabidopsis thaliana
3.8e-22
106.7
172
32.6
AT1G14260
Arabidopsis thaliana
6.0e-20
99.4
186
32.8
AT3G47550
Arabidopsis thaliana
8.7e-19
95.5
67
55.2
AT5G62460
Arabidopsis thaliana
3.3e-18
93.6
61
59.0
AT2G02960
Arabidopsis thaliana
4.3e-18
93.2
85
49.4
Cre09.g400738
Chlamydomonas reinhardtii
9.9e-15
82.0
56
62.5
ENSG00000139266
Homo sapiens
9.0e-08
58.9
89
30.3
gsu131320
Galdieria sulphuraria
1.2e-07
58.5
61
37.7
Pp3c9_10370
Physcomitrella patens
2.6e-07
57.4
51
43.1
Pp3c9_10380
Physcomitrella patens
2.6e-07
57.4
51
43.1
ENSG00000144583
Homo sapiens
3.4e-07
57.0
79
34.2
ENSG00000145416
Homo sapiens
3.4e-07
57.0
58
39.7
Pp3c18_16700
Physcomitrella patens
3.4e-07
57.0
46
43.5
ENSG00000183654
Homo sapiens
7.6e-07
55.8
50
38.0
Pp3c15_8020
Physcomitrella patens
7.6e-07
55.8
51
41.2
Pp3c15_7960
Physcomitrella patens
7.6e-07
55.8
51
41.2
AT4G34100
Arabidopsis thaliana
1.3e-06
55.1
60
35.0
Pp3c1_24550
Physcomitrella patens
1.3e-06
55.1
51
43.1
pte319770
Paramecium tetraurelia
1.3e-06
55.1
57
42.1
Pp3c9_8350
Physcomitrella patens
3.8e-06
53.5
49
42.9
pte126640
Paramecium tetraurelia
3.8e-06
53.5
55
41.8
pte703290
Paramecium tetraurelia
3.8e-06
53.5
58
37.9
ENSG00000173926
Homo sapiens
4.9e-06
53.1
46
39.1
pte84760
Paramecium tetraurelia
4.9e-06
53.1
59
37.3
FBgn0035983
Drosophila melanogaster
6.4e-06
52.8
47
40.4
ENSG00000165406
Homo sapiens
6.4e-06
52.8
47
42.6
ENSG00000278545
Homo sapiens
6.4e-06
52.8
47
42.6
AT4G32670
Arabidopsis thaliana
8.4e-06
52.4
63
36.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing