Gene: AT5G62460 (Arabidopsis thaliana)

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Gene Identifier
AT5G62460
Transcript Identifier
AT5G62460.1
Gene Type
Coding gene
Location
5 : 25075545-25077072 : positive

Family Information

Homologous gene family
HOM02SEM008833
(10 genes in 3 species)
specific family

Descriptions

Description
RING/FYVE/PHD zinc finger superfamily protein
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Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071472
IMP
Gene Ontologycellular response to salt stress1 2
GO:0071470
IMP
Gene Ontologycellular response to osmotic stress1 2
GO:0016567
IEA
PLAZA Integrative Orthologyprotein ubiquitination AT5G38070
GO:0032446
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation AT5G38070
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT5G38070
GO:0070647
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation or removal AT5G38070
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT5G38070
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process AT5G38070
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT5G38070
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification AT5G38070
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT5G38070
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT5G38070
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process AT5G38070
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process AT5G38070
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process AT5G38070
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process AT5G38070
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process AT5G38070
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process AT5G38070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISS
Gene Ontologyzinc ion binding3
GO:0008270
IEA
InterProzinc ion binding
GO:0019787
IEA
PLAZA Integrative Orthologyubiquitin-like protein transferase activity AT5G38070
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity AT5G38070
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity AT5G38070
GO:0004842
IEA
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G38070
GO:0140096
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a protein AT5G38070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus4
GO:0005886
IDA
Gene Ontologyplasma membrane1 2
GO:0005737
IDA
Gene Ontologycytoplasm1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR033275E3 ubiquitin-protein ligase MARCH-like
IPR011016Zinc finger, RING-CH-type
IPR022143Protein of unknown function DUF3675

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.