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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G37560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G37560
Arabidopsis thaliana
1.8e-207
723.0
364
100.0
Pp3c18_14740
Physcomitrella patens
8.5e-96
352.1
365
51.0
ENSG00000115942
Homo sapiens
3.1e-53
210.7
334
35.6
FBgn0015270
Drosophila melanogaster
6.9e-45
183.0
307
35.8
ccr136240
Chondrus crispus
2.1e-38
161.4
366
32.5
Cre03.g199400
Chlamydomonas reinhardtii
1.4e-34
148.7
338
33.4
SPBC685.09
Schizosaccharomyces pombe
4.2e-34
147.1
389
29.3
YBR060C
Saccharomyces cerevisiae strain S288C
9.6e-31
136.0
379
27.4
CM19G00580
Cyanidioschyzon merolae
1.4e-29
132.1
317
31.2
gsu14110
Galdieria sulphuraria
5.3e-29
130.2
313
30.4
CC00G00080
Cyclotella cryptica
8.2e-22
106.3
317
28.1
AA0007G01420
Aureococcus anophagefferens
1.9e-18
95.1
294
32.0
sya00G61770
Synedra acus
7.1e-18
93.2
320
26.6
fso14040
Fistulifera solaris
2.1e-17
91.7
338
25.1
fso133250
Fistulifera solaris
4.6e-17
90.5
337
23.4
tps53210
Thalassiosira pseudonana
4.6e-17
90.5
295
26.4
emh723140
Emiliania huxleyi
1.3e-16
89.0
183
29.5
WBGene00003882
Caenorhabditis elegans
3.0e-16
87.8
281
22.8
Ec-00_006730
Ectocarpus siliculosus
3.0e-16
87.8
164
31.7
tho70800
Thalassiosira oceanica
5.1e-16
87.0
286
26.9
gene16412
Fragilariopsis cylindrus
5.7e-15
83.6
341
25.5
Naga_100006g111
Nannochloropsis gaditana
2.2e-14
81.6
265
28.3
Sro2214_g319320
Seminavis robusta
3.1e-13
77.8
358
22.9
Sro3605_g349610
Seminavis robusta
1.5e-12
75.5
215
26.5
ptri226110
Phaeodactylum tricornutum
5.9e-12
73.6
358
23.5
PSNMU-V1.4_AUG-EV-PASAV3_0081260
Pseudo-nitzschia multistriata
1.6e-09
65.5
327
23.2
ps00G192020
Pseudo-nitzschia multiseries
1.4e-08
62.4
188
29.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing