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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G01275
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G01275
Arabidopsis thaliana
1.3e-149
530.4
260
100.0
AT5G38070
Arabidopsis thaliana
3.4e-46
186.8
250
43.2
AT4G02075
Arabidopsis thaliana
4.9e-29
129.8
173
38.2
AT1G02610
Arabidopsis thaliana
1.4e-28
128.3
181
37.0
AT2G02960
Arabidopsis thaliana
1.2e-27
125.2
130
41.5
AT5G62460
Arabidopsis thaliana
8.7e-26
119.0
107
47.7
AT3G47550
Arabidopsis thaliana
1.5e-25
118.2
176
35.2
AT1G14260
Arabidopsis thaliana
1.6e-24
114.8
231
32.5
Cre09.g400738
Chlamydomonas reinhardtii
1.9e-17
91.3
65
53.8
gsu131320
Galdieria sulphuraria
4.8e-08
60.1
51
43.1
FBgn0035983
Drosophila melanogaster
1.4e-07
58.5
59
42.4
ENSG00000173926
Homo sapiens
1.4e-07
58.5
62
35.5
FBgn0034546
Drosophila melanogaster
1.8e-07
58.2
55
38.2
ENSG00000139266
Homo sapiens
1.8e-07
58.2
69
33.3
WBGene00008433
Caenorhabditis elegans
2.4e-07
57.8
76
36.8
ENSG00000145416
Homo sapiens
2.4e-07
57.8
81
33.3
ENSG00000165406
Homo sapiens
3.1e-07
57.4
51
45.1
ENSG00000099785
Homo sapiens
3.1e-07
57.4
62
35.5
ENSG00000278545
Homo sapiens
3.1e-07
57.4
51
45.1
AT4G34100
Arabidopsis thaliana
5.3e-07
56.6
62
38.7
CM20G05480
Cyanidioschyzon merolae
9.0e-07
55.8
63
39.7
Pp3c1_24550
Physcomitrella patens
9.0e-07
55.8
62
38.7
ccr169360
Chondrus crispus
1.2e-06
55.5
56
39.3
pte84760
Paramecium tetraurelia
1.2e-06
55.5
93
30.1
AT4G32670
Arabidopsis thaliana
1.5e-06
55.1
116
28.4
FBgn0029877
Drosophila melanogaster
1.5e-06
55.1
97
34.0
ENSG00000183654
Homo sapiens
1.5e-06
55.1
46
41.3
pte175990
Paramecium tetraurelia
2.0e-06
54.7
73
34.2
pte228480
Paramecium tetraurelia
2.6e-06
54.3
61
37.7
pte77300
Paramecium tetraurelia
3.4e-06
53.9
95
33.7
pte703290
Paramecium tetraurelia
3.4e-06
53.9
92
29.3
gsu14010
Galdieria sulphuraria
4.5e-06
53.5
63
39.7
gsu14030
Galdieria sulphuraria
4.5e-06
53.5
63
39.7
ENSG00000144583
Homo sapiens
4.5e-06
53.5
50
38.0
Pp3c15_7960
Physcomitrella patens
4.5e-06
53.5
222
29.7
Ec-27_003040
Ectocarpus siliculosus
5.9e-06
53.1
63
38.1
Pp3c9_10370
Physcomitrella patens
5.9e-06
53.1
218
28.4
Pp3c9_10380
Physcomitrella patens
5.9e-06
53.1
218
28.4
Pp3c15_8020
Physcomitrella patens
7.6e-06
52.8
222
29.7
pte138840
Paramecium tetraurelia
7.6e-06
52.8
95
32.6
SPBC14F5.07
Schizosaccharomyces pombe
7.6e-06
52.8
52
38.5
YIL030C
Saccharomyces cerevisiae strain S288C
1.0e-05
52.4
74
37.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing