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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0009G00180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0009G00180
Aureococcus anophagefferens
3.3e-285
981.9
516
100.0
Ec-06_010850
Ectocarpus siliculosus
2.0e-48
195.3
532
32.3
fso198290
Fistulifera solaris
7.7e-40
166.8
507
32.9
fso24190
Fistulifera solaris
3.8e-39
164.5
502
32.9
PSNMU-V1.4_AUG-EV-PASAV3_0031930
Pseudo-nitzschia multistriata
1.5e-38
162.5
496
31.9
CC00G87850
Cyclotella cryptica
4.7e-37
157.5
510
30.8
CC00G118240
Cyclotella cryptica
4.7e-37
157.5
510
30.8
CC00G195110
Cyclotella cryptica
4.7e-37
157.5
510
30.8
ps00G56160
Pseudo-nitzschia multiseries
8.0e-37
156.8
536
29.7
ccr38220
Chondrus crispus
1.8e-36
155.6
580
29.7
sya00G166850
Synedra acus
2.3e-36
155.2
458
31.0
Pp3c21_12090
Physcomitrella patens
8.8e-36
153.3
602
29.1
AT5G39960
Arabidopsis thaliana
4.4e-35
151.0
524
28.6
Pp3c11_19380
Physcomitrella patens
3.7e-34
147.9
533
30.6
ptri69130
Phaeodactylum tricornutum
1.1e-33
146.4
543
29.3
AA0007G04060
Aureococcus anophagefferens
5.4e-33
144.1
531
31.5
gene13399
Fragilariopsis cylindrus
1.3e-31
139.4
511
28.8
Sro699_g189460
Seminavis robusta
1.9e-30
135.6
536
27.6
AT3G12080
Arabidopsis thaliana
9.5e-30
133.3
536
28.2
tho192120
Thalassiosira oceanica
4.7e-29
131.0
479
30.5
ccr88980
Chondrus crispus
1.4e-28
129.4
528
29.5
CM03G00590
Cyanidioschyzon merolae
2.8e-26
121.7
518
28.2
tps88370
Thalassiosira pseudonana
3.7e-26
121.3
526
27.4
Naga_100004g20
Nannochloropsis gaditana
6.3e-26
120.6
349
30.9
ps00G01310
Pseudo-nitzschia multiseries
1.8e-25
119.0
528
28.2
Cre03.g172250
Chlamydomonas reinhardtii
4.1e-25
117.9
600
27.5
emh523060
Emiliania huxleyi
5.4e-25
117.5
522
29.5
sya00G17330
Synedra acus
9.2e-25
116.7
537
25.5
emh360860
Emiliania huxleyi
2.7e-24
115.2
523
29.6
gene9514
Fragilariopsis cylindrus
3.5e-24
114.8
539
28.4
gene10120
Fragilariopsis cylindrus
5.9e-24
114.0
539
28.4
Ec-09_002220
Ectocarpus siliculosus
1.7e-23
112.5
526
26.6
Naga_100109g13
Nannochloropsis gaditana
3.9e-23
111.3
585
27.0
pte133680
Paramecium tetraurelia
3.3e-22
108.2
608
24.0
ptri212510
Phaeodactylum tricornutum
3.3e-22
108.2
581
26.0
gsu132180
Galdieria sulphuraria
4.3e-22
107.8
359
28.4
fso131970
Fistulifera solaris
2.1e-21
105.5
579
25.0
Sro9_g007110
Seminavis robusta
2.1e-21
105.5
583
25.7
tps62700
Thalassiosira pseudonana
1.0e-20
103.2
339
29.2
PSNMU-V1.4_AUG-EV-PASAV3_0021010
Pseudo-nitzschia multistriata
1.8e-20
102.4
580
25.2
CC00G174140
Cyclotella cryptica
5.2e-20
100.9
584
26.0
gsu40100
Galdieria sulphuraria
2.2e-18
95.5
605
23.0
CM02G00030
Cyanidioschyzon merolae
5.4e-17
90.9
688
23.5
Cre16.g658526
Chlamydomonas reinhardtii
1.6e-16
89.4
245
32.7
Naga_100011g22
Nannochloropsis gaditana
4.0e-12
74.7
106
41.5
tho30880
Thalassiosira oceanica
1.7e-10
69.3
233
31.3
AT1G78010
Arabidopsis thaliana
2.2e-10
68.9
152
32.9
Cre16.g658450
Chlamydomonas reinhardtii
2.2e-10
68.9
287
28.6
tps75010
Thalassiosira pseudonana
2.2e-10
68.9
176
33.0
tps215070
Thalassiosira pseudonana
2.2e-10
68.9
176
33.0
Cre16.g681238
Chlamydomonas reinhardtii
3.7e-10
68.2
340
27.4
ccr153240
Chondrus crispus
1.1e-09
66.6
137
34.3
Ec-11_001930
Ectocarpus siliculosus
1.1e-09
66.6
100
42.0
emh307840
Emiliania huxleyi
1.9e-09
65.9
139
36.0
Pp3c13_12516
Physcomitrella patens
1.9e-09
65.9
104
43.3
Pp3c13_12510
Physcomitrella patens
1.9e-09
65.9
104
43.3
CC00G159820
Cyclotella cryptica
4.1e-09
64.7
92
41.3
ENSG00000130299
Homo sapiens
4.1e-09
64.7
59
55.9
emh427970
Emiliania huxleyi
5.4e-09
64.3
138
36.2
YMR023C
Saccharomyces cerevisiae strain S288C
7.0e-09
63.9
136
27.9
SPAC222.05c
Schizosaccharomyces pombe
9.2e-09
63.5
133
33.8
sya00G34240
Synedra acus
1.0e-07
60.1
190
34.7
sya00G169610
Synedra acus
1.3e-07
59.7
100
36.0
WBGene00009557
Caenorhabditis elegans
1.7e-07
59.3
96
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0016360
Pseudo-nitzschia multistriata
2.3e-07
58.9
80
40.0
ps00G19110
Pseudo-nitzschia multiseries
3.9e-07
58.2
80
41.2
sya00G52050
Synedra acus
3.9e-07
58.2
98
35.7
fso178030
Fistulifera solaris
5.1e-07
57.8
68
44.1
gene13671
Fragilariopsis cylindrus
6.6e-07
57.4
80
42.5
AA1320G00010
Aureococcus anophagefferens
8.6e-07
57.0
141
34.8
ptri242730
Phaeodactylum tricornutum
8.6e-07
57.0
101
37.6
fso19760
Fistulifera solaris
1.1e-06
56.6
68
42.6
tho529140
Thalassiosira oceanica
1.1e-06
56.6
252
29.0
ccr98560
Chondrus crispus
1.5e-06
56.2
179
30.2
CMCG00250
Cyanidioschyzon merolae
1.5e-06
56.2
129
28.7
CM05G01510
Cyanidioschyzon merolae
1.9e-06
55.8
252
28.6
Cre17.g747347
Chlamydomonas reinhardtii
1.9e-06
55.8
163
33.1
PSNMU-V1.4_AUG-EV-PASAV3_0033730
Pseudo-nitzschia multistriata
2.5e-06
55.5
130
34.6
CM11G02220
Cyanidioschyzon merolae
4.3e-06
54.7
135
33.3
gene20174
Fragilariopsis cylindrus
4.3e-06
54.7
127
34.6
sya00G123910
Synedra acus
4.3e-06
54.7
164
31.7
FBgn0039189
Drosophila melanogaster
5.6e-06
54.3
64
43.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (5 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (6 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing