Functional Clusters
Cluster information
- Cluster identifier CH_ssp_527
- Chromosome Chr1B
- E-value 0.0000136681
- Data type MapMan
- Data identifier 21.3.5.1.1
- Data description Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)
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Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05M000084 | 2156 | 115 | 1 | 50 |
| HOM05M000090 | 2093 | 68 | 3 | 50 |
| HOM05M008182 | 45 | 2 | 1 | 27 |
| HOM05M008138 | 47 | 5 | 1 | 26 |
| HOM05M000005 | 8445 | 420 | 1 | 50 |
| HOM05M000049 | 3058 | 155 | 1 | 53 |
| HOM05M000531 | 550 | 30 | 1 | 53 |
| HOM05M000266 | 923 | 29 | 1 | 50 |
| HOM05M000549 | 539 | 20 | 1 | 45 |
| HOM05M000250 | 961 | 25 | 1 | 53 |
| HOM05M009194 | 28 | 1 | 1 | 18 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | Sspon.01G0030810-2B | Coding gene | HOM05M000084 |
| X | Sspon.01G0030860-2B | Coding gene | HOM05M000090 |
| X | Sspon.01G0030870-2B | Coding gene | HOM05M008182 |
| X | Sspon.01G0030880-2B | Coding gene | HOM05M008138 |
| X | Sspon.01G0030890-2B | Coding gene | HOM05M000005 |
| X | Sspon.01G0030900-2B | Coding gene | HOM05M000049 |
| X | Sspon.01G0030920-2B | Coding gene | HOM05M000531 |
| X | Sspon.01G0030930-2B | Coding gene | HOM05M000266 |
| X | Sspon.01G0048340-1B | Coding gene | HOM05M000090 |
| X | Sspon.01G0048350-1B | Coding gene | HOM05M000549 |
| X | Sspon.01G0048360-1B | Coding gene | HOM05M000250 |
| X | Sspon.01G0048370-1B | Coding gene | HOM05M009194 |
| X | Sspon.01G0048380-1B | Coding gene | HOM05M000090 |